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Detailed information on CNT30628449


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549182Vigna unguiculataIpomoea triloba10.9720.2788.5261forward
CNT30304176Vigna unguiculataTriticum aestivum16.5528.2282.6192forward
CNT30261973Vigna unguiculataBrassica rapa22.6621.9986.51126forward
CNT3025351Vigna unguiculataPopulus trichocarpa2520.4486.33139forward

Expression of CNT30628449

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MVVSAIMEVTTYGSMLEAGLLSSKYPFPAFSVSLPTLTEAPRFATP*

>peptide 2 (47 aa)
MIIYDIIITIGKHGKEMESNEEALVVSCSNKQGPKQANHNNYQKSKS*

Sequence

>CNT30628449
TGAGAATACACTTTCATATATTATATGATTATTTATGATATTATTATAACAATCGGAAAACATGGGAAAGAAATGGAAAGCAATGAAGAAGCCTTGGTAG
TTAGTTGTAGCAACAAGCAAGGCCCCAAGCAAGCGAACCACAACAATTACCAGAAATCCAAATCCTAAAAAGAGGAAGAGACAAAGTGCAGGTGTTGTTG
CTCATGGCTTCCACAGAATGGTTGTCTCTGCAATCATGGAAGTAACAACATACGGGTCCATGTTAGAAGCCGGCCTTCTGTCCTCAAAGTATCCCTTCCC
TGCTTTCTCTGTGTCCCTCCCAACTCTCACAGAAGCTCCACGGTTTGCAACTCCCTGAACCAACCAACAATCATCACACCACAAATTTCTTATAAAAATT
ATTATGATTAAAAAGAAAAAAACTTCTAGAAGGGGTCCCTAGTGTCGTTTTCTTGTTCAGAGGGTCCATAATGCTTGTTCCCACATAGAAAAGTGTGTCG
AAGGAAAGCTAGTAGAACCAAAAGAGTATAGTATGGTGTTTTTTTGTTGCGTACCC