« Back to Vigna unguiculata search


Detailed information on CNT30628407


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369235Vigna unguiculataOryza glumipatula20.2913.4880.26152forward

Expression of CNT30628407

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MAAPEKAPPNKMLAPTMKPMAMGAMMSPAGVAAPLSVSLL*

>peptide 2 (34 aa)
EASVKWYIQPEPNNDTLSNGGPGEKERDGERMHK*

Sequence

>CNT30628407
AGAAGCATCAGTGAAATGGTACATTCAGCCAGAACCCAATAATGATACATTATCCAATGGTGGACCAGGTGAGAAAGAGAGAGACGGAGAGAGGATGCAC
AAATGATGATAATTTAACTTAAAAGGAGAACATGATCATCAACCATCCAACCAAAGATCAACCAACGGCCACCGATTCAACACGAAAGGAACAACCCGCG
AAAGTAGAATGAAGAAAAACACAAGGGAAAAAACATACACAGATCGAAGAGAAATTCAGTAATTGACAATTTTTTTTTTGCTTATTTTTGTGATTTCTGG
GTCTAGTAGTCAGTGGTTGGGAGCTGCTCGTGGGGCCGACCCAGTAGATCCAGTTGTTGTCCCAGGTCCAGCTAACGACGGCAGGTCCGAATGTGACGGC
AGGGTTCATGGCTGCTCCGGAGAAGGCCCCACCCAACAAAATGTTAGCGCCAACGATGAAACCGATGGCGATGGGGGCGATGATGAGTCCGGCAGGTGTG
GCGGCGCCGTTGTCAGTGAGCTTGTTGTAGGCGATGCCGGAGCCTGAGCCGGCGAACACGAAGATGAGGGTGGAGATGAACTCAGCCAAAGCCGCCTTCA
ACGTGTCGGGGTGAGTGGCCTCCTCGGGCCTTCCGACGGCGATGTTTCTGATCGGCATCTTCAATCGACGGTGGTGATGATTACGACTGGTGAAAGATGA
AGTGAACACCGAGATCACTCACTCAGATCACTCTCTGTTTCGCTGCCAC