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Detailed information on CNT30628391


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 1e-169

BLAST vs NONCODE:
NONPOPT000587, E-value = 4e-120

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672380Vigna unguiculataSetaria viridis48.5670.1582.23557forward
CNT30520816Vigna unguiculataSetaria italica45.2560.0781.89519forward
CNT30549537Vigna unguiculataIpomoea triloba37.7565.0284.3433forward
CNT30698521Vigna unguiculataQuercus lobata21.8844.7484.86251forward
CNT30373104Vigna unguiculataArabidopsis thaliana47.8665.4481.79549forward
CNT30618114Vigna unguiculataSesamum indicum19.0148.2381.19218forward
CNT30266729Vigna unguiculataChenopodium quinoa38.3634.1379.77440forward
CNT3021108Vigna unguiculataCitrullus lanatus47.5233.1183.49545forward
CNT30729630Vigna unguiculataCorchorus capsularis43.6861.1780.84501forward
CNT30381460Vigna unguiculataManihot esculenta53.7967.1483.47617forward
CNT30194995Vigna unguiculataPisum sativum18.3122.0681.43210forward
CNT30638840Vigna unguiculataCapsicum annuum29.2139.2383.88335forward
CNT3090332Vigna unguiculataSolanum tuberosum23.1940.9283.83266forward
CNT30189384Vigna unguiculataSecale cereale22.9333.4682.13263forward
CNT30294498Vigna unguiculataTriticum aestivum38.4555.1980.5441forward
CNT30225924Vigna unguiculataHordeum vulgare37.7576.9180.6433forward
CNT30561874Vigna unguiculataActinidia chinensis38.455083.67441forward
CNT30172560Vigna unguiculataTrifolium pratense28.4247.8788.65326forward
CNT30146819Vigna unguiculataMedicago truncatula34.3552.4686.04394forward
CNT3059692Vigna unguiculataArabidopsis lyrata7.1528.3789.0282forward
CNT30471290Vigna unguiculataSaccharum spontaneum48.5662.0381.69557forward
CNT3013982Vigna unguiculataZea mays16.1363.7984.86185forward
CNT30608385Vigna unguiculataGossypium raimondii34.4471.8283.54395forward
CNT30218668Vigna unguiculataKalanchoe fedtschenkoi20.7561.583.19238forward
CNT3066706Vigna unguiculataLeersia perrieri6.3621.4790.4173forward
CNT30650282Vigna unguiculataRosa chinensis36.2735.3183.65416forward
CNT30624603Vigna unguiculataDaucus carota26.6846.3684.97306forward
CNT30368062Vigna unguiculataSorghum bicolor34.6136.1281.86397forward
CNT30597069Vigna unguiculataOryza meridionalis39.3222.5483.37451forward
CNT30355133Vigna unguiculataLactuca sativa17.723.283.74203forward
CNT30432398Vigna unguiculataPapaver somniferum37.3135.2682.24428forward
CNT3055182Vigna unguiculataAmborella trichopoda36.8840.0280.38423forward
CNT3035650Vigna unguiculataCucumis melo44.3837.7683.89509forward
CNT30331991Vigna unguiculataDioscorea rotundata12.2129.687.14140forward
CNT30101941Vigna unguiculataOryza rufipogon29.3840.3682.79337forward
CNT30496713Vigna unguiculataDigitaria exilis38.6229.4280.14443forward
CNT30551132Vigna unguiculataOryza brachyantha7.2421.585.5483forward
CNT30725315Vigna unguiculataLupinus angustifolius63.3872.2782.53727forward

Expression of CNT30628391

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MSTPATVSINDDLSSSETSITMGATNHKPARRVKVEDGLLIKVLLRNDRLDNMLFKVSSNLVIAHSFIVLGGN*

>peptide 2 (67 aa)
MMIFLPVRPASPWGPPITNRPEGLRWKMVFSSRYFSGMTGLITCSLRSAAIWSLLTVSLCWVEIRTV*

>peptide 3 (60 aa)
MAQGHRWHKKLGQCTFSQVHLPQHSLQPASQYRHHCGQPWWGPCPKRHHHHEHPSHRKYQ*

>peptide 4 (44 aa)
LLKIKYVAWAFSPFQITINRDKIQIKFNCIKRVIILNYQQINWK*

>peptide 5 (29 aa)
MQIIHQYLARHPWKEEIKFFTTRLCLRLL*

Sequence

>CNT30628391
TTTTGCTAAAGATAAAATACGTTGCATGGGCTTTTTCACCCTTTCAAATTACAATCAATAGGGACAAAATTCAGATAAAATTTAATTGCATCAAAAGAGT
AATAATATTGAATTACCAACAAATAAATTGGAAGTAAAAAAAAAGAAGAACAGTTTATGTATGATGATAAGGAAATGGGCATTACACCTAAGATTTAGCA
ATGAAACATGCAAATTATTCATCAATACTTAGCAAGACATCCATGGAAGGAAGAGATTAAATTCTTCACCACACGCCTATGCCTGAGGCTTCTCTGACTT
GAGTGGCTTCACAACTTCCCATGTGAAGTCAGGGTCATCCCTTCCGAAGTGTCCATAAGCAGCTGTCTTCAAGAACCTGTGGCTTCTCTGACTTGAGTGG
CTTCACAACTTCCCATGTGAAGTCAGGGTCATCCCTTCCGAAGTGTCCATAAGCAGCTGTCTTCAAGAACCTGTGGCCACCCCTCTTCAGGTCCAAGTTA
ATGGTGATCATTCCAGGTCTGAAGTCGAAATTCTCCTTCACAATCTGAAGAATCTCCTTGTCGGGAATCTTTCCGGTTCCGTAGGTATCAACAAAGACTG
ACAATGGCTCAGGGACACCGATGGCATAAGAAACTTGGACAATGCACCTTCTCGCAAGTCCATTTGCCACAACACTCTTTGCAGCCTGCCTCACAATATA
GGCACCACTGCGGTCAACCTTGGTGGGGTCCTTGCCCGAAAAGGCACCACCACCATGAGCACCCCAGCCACCGTAAGTATCAATGATGATCTTTCTTCCA
GTGAGACCAGCATCACCATGGGGGCCACCAATCACAAACCGGCCCGAAGGGTTAAGGTGGAAGATGGTCTTCTCATCAAGGTACTTCTCCGGAATGACAG
GCTTGATAACATGCTCTTTAAGGTCAGCAGCAATTTGGTCATTGCTCACAGTTTCATTGTGTTGGGTGGAAATTAGAACGGTGTGAACACGGACTGGAAC
CATGGCACCGTTGTCATTGTAGTACTCAACAGTCACTTGGGTTTTACCATCTGGCCTCAACCATCCACAGGTACCATTCTTCCTAACCTCGGTTAGGCGA
GCACCGAGTTTGGTGGCAAGGACATGGCTGAGCGGCATGTATTCAGG