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Detailed information on CNT30628241


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 4e-14

BLAST vs NONCODE:
NONGMAT001365, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Daucus carotaOryza sativa17.8110097.09481reverse complement
CNT30670969Daucus carotaSetaria viridis37.6389.0499.021016forward
CNT30524649Daucus carotaSetaria italica44.2636.2698.741195reverse complement
CNT30641383Daucus carotaNymphaea colorata48.2641.7195.781303reverse complement
CNT30550219Daucus carotaIpomoea triloba48.9330.4299.71321reverse complement
CNT30702366Daucus carotaQuercus lobata36.8910099.3996forward
CNT30378673Daucus carotaArabidopsis thaliana22.7449.2498.53614forward
CNT30619000Daucus carotaSesamum indicum49.743.9396.941342reverse complement
CNT30283003Daucus carotaChenopodium quinoa33.0493.497.87892forward
CNT3020470Daucus carotaCitrullus lanatus12.5262.7199.11338forward
CNT30730372Daucus carotaCorchorus capsularis49.8169.5197.11345reverse complement
CNT30632346Daucus carotaVigna unguiculata47.8146.1699.381291reverse complement
CNT30490123Daucus carotaOlea europaea31.1548.3198.69841reverse complement
CNT30505430Daucus carotaNicotiana attenuata49.4856.9299.11336reverse complement
CNT30712870Daucus carotaGlycine max27.5644.7798.12744reverse complement
CNT30157615Daucus carotaPistacia vera17.1162.9495.89462reverse complement
CNT30185187Daucus carotaSecale cereale48.4436.9898.621308reverse complement
CNT30299053Daucus carotaTriticum aestivum48.4436.5198.321308reverse complement
CNT30221907Daucus carotaHordeum vulgare34.7478.196.27938reverse complement
CNT30394721Daucus carotaTriticum turgidum48.4435.7198.621308reverse complement
CNT30569655Daucus carotaActinidia chinensis49.4137.4698.581334reverse complement
CNT30543268Daucus carotaBrassica napus34.4440.5297.85930reverse complement
CNT30554477Daucus carotaOryza glaberrima14.3353.5397.16387forward
CNT30147396Daucus carotaMedicago truncatula49.1544.6199.021327reverse complement
CNT30438197Daucus carotaAegilops tauschii37.8197.5298.821021reverse complement
CNT30258698Daucus carotaAvena sativa15.4151.4997.36416forward
CNT30660235Daucus carotaTriticum dicoccoides34.8510097.98941forward
CNT30140161Daucus carotaLolium perenne48.4438.4398.931308reverse complement
CNT3017954Daucus carotaZea mays48.734.7198.021315reverse complement
CNT30605146Daucus carotaGossypium raimondii38.768.4399.041045forward
CNT30216563Daucus carotaKalanchoe fedtschenkoi49.334.2299.41331reverse complement
CNT30655407Daucus carotaRosa chinensis48.339.0199.081304reverse complement
CNT30207637Daucus carotaHelianthus annuus49.6768.5697.841341reverse complement
CNT30682011Daucus carotaTriticum urartu36.1110098.67975reverse complement
CNT30721631Daucus carotaTriticum spelta48.4437.6698.471308reverse complement
CNT30346087Daucus carotaEragrostis tef26.3768.8699.16712reverse complement
CNT30359520Daucus carotaLactuca sativa49.6352.6398.881340forward
CNT30429739Daucus carotaPapaver somniferum48.2240.4794.321302reverse complement
CNT30571858Daucus carotaVitis vinifera49.338.499.71331forward
CNT3057903Daucus carotaAmborella trichopoda43.4148.9193.171172forward
CNT30108930Daucus carotaOryza longistaminata32.1937.1497.47869reverse complement
CNT3038324Daucus carotaCucumis melo48.8569.9497.81319forward
CNT30499372Daucus carotaDigitaria exilis45.1535.8698.931219reverse complement
CNT30603680Daucus carotaOryza punctata48.4433.1498.851308reverse complement
CNT30557400Daucus carotaPanicum hallii24.2647.7497.25655reverse complement
CNT30113381Daucus carotaFicus carica16.5210096.41446forward

Expression of CNT30628241

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MCRFPNQKIGEHPFSRSYGVILPSSFDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFEVFSWKFQPC*

>peptide 2 (58 aa)
MGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPHTWVRSSKAC*

>peptide 3 (39 aa)
MADFRLCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*

>peptide 4 (38 aa)
WLWKVKVVSFSTRSLHTSRCLHLSPIEVLFKNLVRELV*

>peptide 5 (29 aa)
MGTNLQGYHLLWPDLPTFSQLQFTAPLVP*

Sequence

>CNT30628241
TTTGGTTATGGAAAGTGAAAGTTGTTTCGTTTAGTACGAGATCGCTTCACACCTCGCGGTGCTTACACCTCTCGCCTATCGAAGTTCTGTTCAAAAACCT
CGTCCGAGAACTTGTATAGAGAAGGATTTCCCGCGGCGCAGCAGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACAC
CATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGCAGATAGGAACCGAACTGTCTCACGACGT
TCTAAACCCAACTCACGTACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAAC
GACTCCGTCGATAAGAGCTCTTGGGAGTCATCAGCCTGTTATCCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCA
CTATGGCCGACTTTCGTCTCTGTTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCTTAGCTTGAGCCTACCTTC
GCACACCTCCGTTACTCTTTAGGAGGCATCCGCCCCAGATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCATC
CTTAGACGAAAGAGTGGTCTTTCAGGATTGGTCGTTGTGTGTCACCACCTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTT
AAGGTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTA
CACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTT
ATAACACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGC
TACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCT
CTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCGGGAGGATCGCCCTCCCAATTCGAAGTTTTTTCCTGG
AAGTTTCAACCTTGTTGACTATGACAACAGTTGCCAGTCGCGTAGGGCGACCGGGCCAGGCCGAGTCAGAAAGGCTTTGATGACTCAAGGTTCATATTAG
GGAAAGGAGAGTGAGGGGAAGAGGGGGCAGCCCTCGGCCCGATCATCCAATTCGCTCCAACAGACAGGCATGGTTCTGTAGTCAAAGCAACTTCGTCACT
TTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGTTTCCTTAGGGACCGATTCACTCTGCGTAGATTGACTGAACGCAGAAAACCTTCCACTGGCAGGCG
ATCGTGTTTTTCACAGGATTTCTCGTTACTCATGTCAGCATTCTCGCTTCTGATATCTCCAGGTGTTGTCACCAAAAACCTTCCCCGATTGACAGAACGT
TCCGCTACTGACACTTGAAAAAGCAGCTTTCAAGGTCTCGTCGCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAGCTAGACCAGTG
AGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACC
TTAGCGTACGATCTGGGCTGTTTCCCTCTCGACTTTGGATCTTAGCACCCAAAAAGTCTGTCTGTACAAACGATCTAGGCCTGTATTCGGAGTTTCCCTG
GGGTTGGTAAGGCGAAATGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAG
CTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTC
TTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGC
TGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTGCGCTTGACTAATATAAAGTAAAGGCTCTAAGCTCCGCTCCTTCGA
CTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGG
AATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTCGCGTAAAAGCGATCAGAATTAGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGGAACGAA
TCTACAGGGCTATCACCTTCTTTGGCCAGATCTTCCAACCTTTTCACAATTACAGTTCACTGCGCCCTTAGTACCCTAAGGCACTAAGAAGCTTGAAAGC