CANTATAdb - search

Detailed information on CNT30628227

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30619421	Daucus carota	Sesamum indicum	99.33	67.42	94.94	890	reverse complement
CNT30434135	Daucus carota	Papaver somniferum	99.33	81.88	95.62	890	forward
CNT30724960	Daucus carota	Lupinus angustifolius	98.66	89.66	95.14	884	forward

Expression of CNT30628227

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLTLEPFSEDQGRSAVHPTGGSRQSASLRLTGLITR*

>peptide 2 (86 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDPHQRTLRPGLRLRFRSDRSALLLIGAWNLPRRPGIGRALKRHPFSGLVDSAGELLHTP*

>peptide 3 (53 aa)
MAHLELLIPWHGSMKQPRRPTYLNLRIGRGRCAPDASNHWLYPIELAPGLQLS*

>peptide 4 (31 aa)
TGLPRLLGSTNPCASAVHMEPFPSSAFKVLI*

Sequence

>CNT30628227
GACGGGGCTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATA
TTTGCTACTACCACCAAGATCCGCACCAACGGACGCTCCGCCCAGGCTTACGCCTAAGGTTTCGCAGCGACCGCAGCGCCCTCCTACTCATCGGGGCCTG
GAACTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGG
ATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGG
TTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTTGATTCCGTGGCACGGCTCAATGAAGCAGCCGCGCCGTCCTACCTATT
TGAATTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCACCCGGGCTCCAGCTATCCTGAGGGAA
ACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCA
CCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGAATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGT
CGGTCGGCGGTGCACCCCACAGGGGGATCCCGCCAATCAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCAGACTCC