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Detailed information on CNT30627951


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549212Daucus carotaIpomoea triloba41.6610.6782.92322forward
CNT30170457Daucus carotaPistacia vera23.2914.1785180forward

Expression of CNT30627951

Peptides detected in this lncRNA

>peptide 1 (41 aa)
GLVFLQEISSNLTARDLFLRSNLLILYRNDNSNNFFVLNAL*

>peptide 2 (41 aa)
MVIQVSKIQTRWMFVVPTILVSSDPDKDRDNFEQSFRVVDS*

Sequence

>CNT30627951
TAGGGCTAGTGTTTTTACAAGAAATCTCTAGCAACCTTACTGCAAGAGATCTTTTCTTAAGATCAAACCTGTTGATACTTTATAGAAATGATAACTCCAA
CAATTTCTTTGTTCTAAACGCCTTATAATTTCCAGAAATTAGTCACTTCAACAGCCTTCGATGGTTATACAGGTATCCAAAATACAAACGAGATGGATGT
TTGTTGTCCCGACCATTCTTGTTAGTTCCGATCCTGATAAGGATCGGGATAATTTCGAACAAAGTTTTCGTGTTGTTGATTCCTAGGTGTAGTGCTTCTT
CCCCTATGTGGCCTATTGGTACTGGTGGAGTAGGATTGACCTGTAAATACAGAACCTAACAGAACCTATAGGTGTAGCCTTTCGCTCAATACTAGAGTCG
ACAATTAAACCATAGCATCTGAGGTTACATTAACGGAGGATACACGACAGAAGGAATTGTTCTATTTCCAAACTTTACCTTCAACAAGCGTAGATTTTTT
TTTTCAAAATTTTTATTTCTATTATATATCTTTCTCGTAATATTGAGAGCAATAAAAAAAAGAATCAAATCGCACCATCTCTGTAATAGGTAAATGCCTC
TTTTTCTCCTGAAGTTGTCGGAATTATTCGTAATAAGATATTGGCTATAATTGAAAAGGTCTTATCAATAAAATTTCCATTTATCCGCGATCTAGGCATA
GGTAGCAATCCTAACTATAATTATTCTCATTACCTCTAGTGGTAAACCGATACCACAAAGAAAAGAATTGTAC