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Detailed information on CNT30627916


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36284|NU5M_MAIZE, E-value = 3e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619448Daucus carotaSesamum indicum24.8378.7396.21896forward
CNT30197509Daucus carotaPisum sativum20.3432.2597.82734forward
CNT30633270Daucus carotaCapsicum annuum18.7481.2596.6676reverse complement
CNT30182368Daucus carotaSecale cereale14.3325.4996.32517forward
CNT30299594Daucus carotaTriticum aestivum12.4259.2696.65448forward
CNT30221864Daucus carotaHordeum vulgare18.7133.2594.96675forward
CNT30385170Daucus carotaTriticum turgidum14.3336.7495.74517forward
CNT30586133Daucus carotaMusa acuminata18.6330.3989.43672forward
CNT30541214Daucus carotaBrassica napus8.62102.391.64311reverse complement
CNT30439823Daucus carotaAegilops tauschii7.8263.0993.97282reverse complement
CNT30468144Daucus carotaSaccharum spontaneum19.7325.394.94712forward
CNT30210175Daucus carotaHelianthus annuus6.7164.3696.69242forward
CNT30574574Daucus carotaVitis vinifera22.3123.9298.51805forward
CNT3056795Daucus carotaAmborella trichopoda8.0154.3294.12289forward
CNT30104639Daucus carotaOryza rufipogon17.3557.0195.05626forward
CNT30577102Daucus carotaOryza barthii6.1397.3692.31221forward

Expression of CNT30627916

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKDDRLSTQEDRESHIREKVTNRVEPSNIAKA*

>peptide 2 (38 aa)
MECNGIDGRGLPAPKSDDSLVPLSIGTSWHTTETTPAR*

>peptide 3 (40 aa)
MLDKLSKKEEKEPGVGAYITACLLTKPSWQAPPVRLLFLT*

>peptide 4 (42 aa)
MGIPINRKMKNIEFEFSPFLSLNRCIWSDKVQYNTRRWNAMG*

>peptide 5 (55 aa)
MVGAANSDSARISFFGSTKGELAQKLDRGQDAVGRRRLTQVPPEPREMVAYYTAH*

>peptide 6 (58 aa)
MNRQKEKSEMATAFGLGKETSKASTTSQTSLYFIGPKRCGNVNTPLTKKRTSLNFKKR*

>peptide 7 (73 aa)
NHLWSPILAIECSILADFQDLKRRIFKSSINQGNLLLLLLPSVKDNVTEETTIAAFNEPLRDSLEMKYLDPQT*

Sequence

>CNT30627916
AACCACCTATGGAGTCCTATTCTTGCGATAGAATGCTCAATTTTAGCCGATTTCCAAGATCTTAAAAGAAGGATCTTCAAGAGCTCGATAAATCAAGGTA
ATTTGTTGCTTCTGCTTCTGCCTTCAGTTAAGGATAATGTGACTGAGGAAACCACTATTGCTGCTTTTAATGAGCCCCTTCGGGATTCCCTTGAAATGAA
GTACTTAGATCCACAAACTTAGGATCAAGCTATTGCTCTACTGCCCATAAACTGGTATAAGATGAATGTAAAGCCTGAGCACATAGAGCATAGAGAATGC
CCGCAATGTGTGTAGCTATCAAGTGAAGGACTTCCGGGAGGTGGGCCAGAACGATTGAACTGTGCTGCTTTGTTGTTTGCATGTCTTCAACCACCAAGAA
ATGACTAACATTAACAGCGGCTGTTAAAGCAAGGGCATGGGGAGAATGCAGATTCATAAGCCAAGTAGGATAGAAGTCTAGATTGTGGCTAAGAGCACAC
ACCAGTATGAACAGACAGAAAGAAAAGTCTGAGATGGCTACGGCTTTCGGACTAGGCAAGGAGACCAGTAAAGCATCAACTACATCTCAGACTTCCCTTT
ACTTCATAGGACCTAAGCGATGCGGAAATGTGAACACACCTCTAACAAAAAAGAGGACCTCCCTTAACTTCAAAAAAAGATAAAGCCTACGGCTTAAAGA
CACTTTCGGGAATGGGAAGGTGATTTTACATAGAGTATAAAATGCTAGATAAACTTTCAAAGAAAGAAGAGAAAGAACCGGGAGTTGGCGCCTACATAAC
TGCTTGCTTGCTTACCAAGCCATCCTGGCAAGCTCCTCCAGTTCGCTTATTATTCTTGACTTGACTTATTATTATAAAAACTACTCACTATCCAAATGAA
AGACGATCGATTATCTACCCAAGAAGATAGAGAGTCCCACATACGAGAAAAGGTCACAAATAGAGTTGAACCAAGTAACATTGCAAAGGCATAATGATAG
TAGGGTCGGGATATCCCCGCCCTCCGAACCGGACGTGAAGGTCTCCCCTCATCCGGCTCTCTGCAGGGGAATCTCCACTCACTGCTTCCCCTAATATCCT
CCCTTTACCACATCATGGGGGTTTACAGGAGATCCCAGAGGCTCGCTCGGAAAGGCTGCTATACCATACCTTTTGACTTAACTCTACTCTAGTAGTCACT
AGACTCACTATAGTAGTCCGTCCGGCTGCTCTTGCTGAAATCATTACTCTTCATTATCCCGTGCTCTAGCAATTGCGCTCCCTAGACCACTGCCGTGTAG
TTAGGTAGGGACAATCAATCCGTAGTGACGGGAATCTAGGAATGAATGGGGATCCCTATCAATAGAAAAATGAAGAATATAGAATTCGAGTTTTCTCCCT
TTCTCTCACTCAATAGATGTATCTGGTCTGATAAGGTACAGTACAATACGAGACGATGGAATGCAATGGGATAGATGGTAGAGGGCTGCCTGCGCCCAAA
AGCGATGATTCACTTGTCCCCTTGTCCATAGGGACCTCGTGGCATACAACCGAAACGACTCCCGCTAGATAGCCGCCCCTTTCTCTCTTTTTACAGCCTC
GTGGACGGACGAAAGAAGGGAAGTTACAGAACTGGACAGTGAAGGCTCGCGAAGTAGACAGCAAGCAGCAAGCAACAGCTTCTCAGCCCCCTTTTCTATT
AGTCAAGCGCTAACGAGCAAGAAAACGGATGTGCTAACGAGCGAGCGAAGTATACGTAACGAGGCATTAGAGCAACGGCTTTCAGCGCAATCCGTTGCTT
GTTGCCCCTTTCTCTAAGAAGAAGGTCCGCTTTGAAGCTGGCTGCTCTGCTATACTATACTAGTTGTAGGGCGCTAGCGCTTGACTAATAGAATCTCAAG
TATAGGGACTCTATCATGATCTTACGAAGCTAAAGATATAAAAATGGAAGAACGCGCTCTTTTGCTCGCCCCTCTCTCTAAAGGGGCGTAAGTACTTCAC
TCGCTAGGGGATGGGATTCATTCACTTGCATTCCTGCTAGCACTACAAAAAGCTCCGGTCTTAACGCCCCTACTACTGCTGTGCAGCCTTTCCTCGGGTT
CGTAGAGTCGGGTTTCCCGTTTACCCACAACGGAGGAGCCGCCCCCACCAGGCAGGCGGCCACGGGTCATAACGCACTCTTCGCACAACAAATCCACTTT
GAAGTTGACTTATTCGCTCGGCCAATCGTCGGAATGTGTACGAGATACCATAAGGGCCCAATATCTCAATAGCACCTTTGTCTAAAGCTTCGAATGAGAC
TTCATATCCGAAACGCAGGAACGATCTGACTAGAAAGTCATTCAAAACTTGATCGAAGAACCAGCGTTTATTGAAGAAGCTATAGAGTCGATTACAAAAA
GTACTAGTTTGAAAGGCTCGTTGGAATTGATCCGCTACGGGATTTACATTATACGCAACAGAAGCACCTGAAGTACTAAACGGAATAGGTATTAGTTTGG
TAATGGTTGGAGCAGCAAACTCGGATTCGGCAAGAATCTCATTTTTTGGTAGTACGAAGGGGGAATTGGCCCAAAAATTGGATAGGGGTCAAGACGCTGT
CGGGCGCCGGCGGCTGACTCAAGTGCCCCCCGAACCGCGCGAAATGGTCGCCTATTACACGGCTCACTAACTCTGCCTGGGGCGGGGGTACCTATTATTC
GTCGGCGGAGTGGACATCATCATCTGCAGACAAATAAAAATTATGTTTCATCATTAGCTAAAGTGGAATAGTATGACTGGCTTTCCGGAAAAGAAGACGA
AACCCGCTTTATCGATATGATAAACATGCGCTCAAAAATACCTCCTAAACCCCCCCACCAGCCAAGTGATCGAGTTTAGTCTGAATTTGCTGTAGAAGTT
GCTCCCGCTCCGGGCTGACTTCAAGGAAAGATAGGATTGGGCAATTCAGCCGGTTCTGGAGCTTACCTTTGAAAGCGACTCCAGTAGGTATCCTTGGCTT
AGTTGGCTGGGCTGCCCAGTTTCATTTCCTGCAATAATAGTAAATCTTATGTTGTTCTACTATCCTTCTCATTTTCTTCAGTTTCCTAAGCCTCTAATCT
TCTAGGAGAAGTTTATTCATAAGAGAACCGATTCATCCTGACCGGGTCCTTTTTTTATCTTGAGTACTTTACAAATAGGGGAGGCAATTTCGATGTATCA
GTCAGAATCACTAGCCATTTCGACCGCTTCTCTTCTTCCTCATTTCTTGTTGGAAATTTGTTTTCACTGACTCACTTTCTGATTACGAGTTTCTCAGTTC
CGGGGGGACTCGCTTACCTTTTCCTTTTTTGTAGAGGCCTCGGCGCAGCAATCTACTCCTTCCGTTTACATATGAGATGATGTAATAAGGCTTGCTTGTC
GAGCTGATCTCATCCCATCTGCTTCAGGCCTATCTGCATTTGTTGCTTAGTGGCAATCCCCATCTTTTTTTGTAACTGACTTACTTAAATAGTCTTTTTT
TGAAACCAGTTCGGTTCTGTTAACTCACTTGTAAGCTGTCTTTCGATCAGAAATAGGTTTCACATCTCACATATATGTGTTAAGCATATAATTAGAATAT
AGCCTGAT