Detailed information on CNT30627910


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390425Daucus carotaTriticum turgidum30.0215.3490.34145forward
CNT30552006Daucus carotaOryza glaberrima30.028.2491.72145forward
CNT30443845Daucus carotaAegilops tauschii30.0229.989.66145forward
CNT3081844Daucus carotaBrassica juncea32.0922.1791.61155forward
CNT30684485Daucus carotaTriticum urartu30.0226.8590.34145forward

Expression of CNT30627910

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKEEVIGNPSTFGFPPPIAAKVKGSPFTFLDMKRQSSR*

Sequence

>CNT30627910
TCATTTAGAAAGCCTTATCTCTATCTTTCAGCAACTGAACGGGAAGTGGTTTAGGAAAGGACTTTAGAATCGGATGCGCTCGCCCAGCGAGAAAGGCCCT
GACCCTGCCAACCAAGTCAAAATCAAAAAGAAAGAAGAGAACAAAGGAGAGTGAAAGCCCTTCTAGGGATATGGAAAGAATGAAGTAATGAAAGAGGAAG
TCATCGGCAACCCCTCAACCTTTGGATTTCCTCCACCAATTGCTGCAAAAGTAAAGGGTTCGCCCTTTACTTTTTTGGATATGAAAAGGCAAAGTTCTCG
CTGAAATAATTAGGATTTTCTCTTTGAACTCGTCCCGGAATGGGCATTATGGCAAAGAACAAGAAGAAGACAAAAGGAGAAATTTGCCCAATAGTCACAA
ATGGTGCCTCCACAGGTTGACATCCGATCCAACCTAGTAGTAAGCGATCCGCCAAAAACAACAAATATATTATATGGTAAATC