Detailed information on CNT30627908


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30576813Daucus carotaOryza barthii32.5713.4385.8699reverse complement

Expression of CNT30627908

Peptides detected in this lncRNA

>peptide 1 (29 aa)
ESTSRCQTTPSIRALGSHQPVIPGVPLIR*

>peptide 2 (52 aa)
MADFRLCSTSRSHSQAVVTPFVQVATYATRNFATLGQLELLPPFTGASIQSL*

Sequence

>CNT30627908
TGAGTCGACATCGAGGTGCCAAACGACTCCGTCGATAAGAGCTCTTGGGAGTCATCAGCCTGTTATCCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCC
CTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGACCAGTCGGTCTCACAGTCAGGCAGTCGTTACACCATTCGTGCAGGTCGC
TACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATAACACTTCTCCTTCCGA
CCTT