Detailed information on CNT30627097


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0G9Q1|YCF2_DAUCA, E-value = 2e-112

BLAST vs NONCODE:
NONMEST002259, E-value = 5e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617222Daucus carotaSesamum indicum50.6796.6993.54263forward
CNT30591166Daucus carotaMusa acuminata49.3313.0693.36256forward
CNT3081516Daucus carotaBrassica juncea35.6564.2495.14185forward
CNT30607759Daucus carotaGossypium raimondii68.5911.994.1356forward
CNT30687250Daucus carotaTriticum urartu57.0333.7987.5296forward
CNT30622146Daucus carotaCajanus cajan10036.4294.03519forward

Expression of CNT30627097

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVMDPNPLVWNIFFSKRNPLVYERVKKCFRCCGIRS

>peptide 2 (33 aa)
HFFHRVRVETKDLERPIRRNNSKDKEVSLISSC*

Sequence

>CNT30627097
CCCATTTCTTTCATCGGGTCCGGGTAGAGACCAAAGATCTTGAGCGACCGATCCGGCGGAACAACTCAAAAGATAAAGAAGTATCGTTAATTTCTTCATG
CTAGTTCCAAGTTCGAAGTACCATTTGTACAAATAGGAATCCCCTTCGTTACATGATTTCTTCTTAATATAGATAGATATAGGATCTATGGGGCAATTAC
TTAGAAGTACATTTTGTGCTACAGCCCTTCCGATCTGATAGAAAAGGATCCCATGATCCTGAACCGATCTTACCTGGGATCGCAAATCCCAAGTTTGTCT
ATGAAAAGCGGATCTAATTGTATTAGTGTCTATAATTGATTTCTTCTGTGTAATACTAATCGACAGGGCCTCATTGGTAAGTGCTACAAGATCTCGTGCA
TTGGAACCCATGGTTATGGACCCGAATCCATTAGTATGGAACATTTTCTTTTCCAAGCGAAATCCCCTAGTATATGAAAGGGTGAAAAAGTGCTTTCGTT
GTTGTGGAATAAGAAGCCT