Detailed information on CNT30626736


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40450|EFTUA_NICSY, E-value = 7e-112

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376649Daucus carotaArabidopsis thaliana32.8913.4681.14297forward
CNT30280569Daucus carotaChenopodium quinoa22.1541.1582200forward
CNT30197940Daucus carotaPisum sativum11.1821.3184.16101forward
CNT3045091Daucus carotaPrunus dulcis22.1550.1385.5200forward
CNT30237230Daucus carotaBrassica oleracea34.9937.6281.01316forward
CNT30262296Daucus carotaBrassica rapa19.3821.7179.43175forward
CNT3037862Daucus carotaCucumis melo37.7662.882.99341forward

Expression of CNT30626736

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MVNAAVRVVFPWSTCPIVPILIWGFFLSNFPRAARTVSLVARERNGEVGV*

>peptide 2 (32 aa)
MCSLVCGIGPSAPETTKIAPSICAAPVIIFLT*

>peptide 3 (29 aa)
MRFIEEEDRAEIAIFALSKQEGFGEFWER*

>peptide 4 (55 aa)
HSLSPLLIAGFSISASNANNADPDTIGISSPGNSYLFNSSLTSNSTSSKSSASST*

>peptide 5 (93 aa)
MPWTIHMSIMPTLSLILNSSCINSNPTRSLLRSSINFIVLLGCRPSHSSKRHGQRSSQSGFPMVNVPNCAYIDMGFLPFEFPTRCAYGQPGGA*

Sequence

>CNT30626736
CACTCATTGTCCCCTCTCTTAATCGCGGGATTCTCCATCAGTGCTTCCAATGCCAACAATGCTGATCCTGACACAATTGGAATATCATCCCCTGGAAACT
CATACTTATTCAATTCCTCCCTAACCTCCAACTCCACAAGCTCCAAAAGCTCGGCATCATCAACCTGATCCTCTTTATTCAAGAAAACAACCATATTCGG
AACCCCCACTTGTTTCGCCAACAAAATGTGTTCTTTAGTCTGTGGCATTGGCCCATCAGCACCCGAAACCACTAAAATCGCTCCGTCCATCTGCGCAGCC
CCTGTAATCATATTCTTGACATAATCAGCATGCCCTGGACAATCCACATGAGCATAATGCCTACTCTCAGTCTCATACTCAACAGTAGCTGTATTAATAG
TAATCCCACGCGCTCTCTCCTCAGGAGCAGCATCAATTTCATCGTACTTCTTGGGTGCAGACCCTCCCATAGCAGCAAGCGCCATGGTCAACGCAGCAGT
CAGAGTGGTTTTCCCATGGTCAACGTGCCCAATTGTGCCTATATTGATATGGGGTTTCTTCCTTTCGAATTTCCCACGCGCTGCGCGTACGGTCAGCCTG
GTGGCGCGTGAGCGAAACGGGGAGGTGGGTGTTTGAAATTGGGAGGACAACGTTGATGGGTTGGCGAGAAAAGAGGAGGACAACGTTGATGGGTTGGCGA
GAAAAGAGGAGGTGAGGATAAATTTCCGTGAACTTGTCGGAGAAAAGGCGGAATTAGGGTTAGGGTTTGCAGGGTTTATGAGGTTTATAGAAGAAGAAGA
TAGAGCTGAAATCGCCATTTTTGCTTTAAGCAAACAAGAGGGGTTCGGAGAATTTTGGGAGAGATGAGATAATAACAAGGAGATTGTGTGTTTTGTGTGA
GTG