Detailed information on CNT30626303


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-125

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709517Daucus carotaGlycine max35.7888.8185.45825forward
CNT30605652Daucus carotaGossypium raimondii39.6492.781.73914forward

Expression of CNT30626303

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MKGRLFLNIVVCKCAAIFKLFSSKYKPLLVWWDALLVLNLCFDIINSVRALHL*

>peptide 2 (71 aa)
MKCGFLLNVVICQCPSVLQLLPSKYQPLLIWRNSLFVLDLCLNIVNCIRALYLQGNCLSSKRLDKDLHATT*

>peptide 3 (52 aa)
MSLCWSGGMPSLSWILALTLSIVSELSTSRVMVFPVSVLTKICMPPRRRRTK*

>peptide 4 (53 aa)
MKGRFLLDVVVSKGATVFQLLASKNESLLVWGDALLVLDLSFNIINSVRAFNF*

>peptide 5 (72 aa)
YYYLSFSETETHTHYKLLTRSLEISTSKHAVIYISCFNGIKVAPHKTLKYKKHKYPSRTGNLQSFSKQAHKM*

>peptide 6 (29 aa)
MSFRPPTASQQISTSADLEEFPLCLGSLP*

>peptide 7 (36 aa)
MYMHKLRSTMIINPKIIPLNYKQTLKSNRKFIISTN*

Sequence

>CNT30626303
TATACTACTATCTCTCCTTTTCAGAAACAGAAACACACACACATTACAAACTACTAACAAGAAGTTTAGAAATAAGCACATCTAAACATGCAGTAATATA
CATTTCTTGTTTTAATGGAATAAAGGTCGCTCCACATAAAACATTAAAATATAAAAAACATAAATATCCCTCAAGAACAGGAAATTTACAGTCTTTCAGC
AAACAGGCACATAAAATGTGAACTTAAACCAAATAAAGATTCAGAAATTTTTAACAGGGCTCAATGCCCTAGAACACACCACCACAATTCAAAAACCACC
ACGTAGACGAAGAACAAGATGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCCATCTTCAAGTTGTTTTCCAGCAAATATAAGCCTC
TGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTTTGCTTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCTAGCGTGATGGTCTTTCCTGTCA
AAGTCTTCACAAAGATCTGCATTCCACCCCTCAGCCTCAATACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCTGCCAATGTCCTTCCGTCCTC
CAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATCTTTGCCTTAACATTGTCAATTGTATCAGAGCTCTCT
ACCTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCATGCCACCACGTAGACGGAGCACCAAATGAAGGGTCGATTCCTTCTGGATGT
TGTAGTCAGCAAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCTTT
AACATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGATGGTCTTTCCAGTAAGTGTCTTAACAAAGATCTGCATGCCACCACGTAGACGAAGAACC
AAATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCTAAGGTACGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGA
TACCTTCTTTGTCTTGAATCTTAGCCTTGACATTGTCAATGGTGTCCGAGCTTTCTACCTCAAGAGTGATGGTCTTCCCAGTAAGAGTTTTCACAAAGAT
CTGCATCTGTTGTTAAGGCAAGACCAACAAGGAAATTAATTTACCACACAAAAAACAAAGTTCAAGTAACCTTCACAGGATTAAAACACTTGCATAACCA
TGAAAAATATACAAAAAAACATATAACGATCAAAGAGAAAATCCACACAAACACATCAACTCGTGGGGTGAAATCCAATTATGCTCGTCTTATCAACATC
ATTCCAAATATGTTGGACATGAATGGTTATCCTTAAGTAATTGCAAACTAAGTAGTTGCAAACTACATAACCTTAATTCAAATCAATAATCCAAATAATC
ACTATACCAATTGCATCTCAATTACCCTACTACGATTTCTATTATACCACAGTTATAACGTCAATCCCTAATTATCACACTTAGTCGTATTAAGAGACTT
AGATTAGACATCCTATTAATCCGTTTCAGCAAACAAACAATCCTCACAACAAAAAAAACCAGAACAACTCCTCAACAAATCACAAAAGCTAACACCACAA
GACATCATACTAAACACCGATACGAAAAGGAACATAAATCTTGATCATCGTTCATCATAAAAGGATAAACTAATAACCTTCAACTGGAATCCTCTGATTT
TCTAGTTTCAATGTATATGCACAAACTTCGTTCAACAATGATCATAAACCCTAAAATCATACCATTAAATTATAAACAAACCCTAAAATCAAACCGAAAA
TTTATAATTTCAACAAATTAAAAAGCGCACACCTACTAGTCCAATTACGTTTATTATTTTATGATTAAACAAATCCCATATCCATACCGTCCTTAACAAA
GTTCGAACCTCCACATACAATTAGACGAAGATCATTTTTCAATCTCTCACAACGACAACAAACCAATACAATCAAATAAAACACAATAGATCTAATCAAA
CGCTACCGATTACAAATTATACAAATCAAATACGAAGATCTAATTACACAGCTGGACATCTTGTATTATCATCACAATTCACAAAAACATAACTGAGTAC
ACATAGAAAAGGAGAATTAAATACGTACCTTGAAAATCGTTGATCAAAACAAAAGAGAGAGAATTATGTATGAATATAAGGGTTTGAAAATTGTTTAAGA
ACAAAT