Detailed information on CNT30626164


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 7e-151

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-138

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701585Daucus carotaQuercus lobata24.6465.6283.94691forward

Expression of CNT30626164

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MNSRSTQESERRFNLFFFNYKKIDITNFK*

>peptide 2 (52 aa)
MSLCWSGGMPSLSWILALTLSIVSELSTSRVMVFPVSVLTKICMPPRRRRTK*

>peptide 3 (36 aa)
MPANTKFYVNKLDEFHQIYTTISPFQKQKHTHITNY*

>peptide 4 (36 aa)
MYMHKLRSTMIINPKIIPLNYKQTLKSNRKFIISTN*

>peptide 5 (33 aa)
MNSTRYILLSLLFRNRNTHTLQTTNKKFRNKHI*

>peptide 6 (53 aa)
MKGRFLLDVVVSKGATVFQLLASKNESLLVWGDALLVLDLSFNIINSVRAFNF*

Sequence

>CNT30626164
TTGTCCTAAAGCAAAGGTTCGATCTAGGGATGGACTCATTTAACTAATGAAGCTACACAATTTCCCGTTTCGAAGGCTTTCAATTTCAAGCTGGGGATAA
ATTATTGATTAATGAAGTCATCAGATATCAATTATCCTAAAATGTGTAGTATGAGGAGTGCTTAGTTCGATAACGTGACATCTTCAACACTTCCCCTCAC
TAGAAAACTTTAACAAAGTCCAGTGTCTTTATAATGAAATAAACAACATAAACCATCTAATCTGCCATCTTATTACACTAAAGGAAACAAGGAACGTATA
TGAACAGCAGGTCCACACAGGAATCTGAGAGACGATTTAACTTGTTTTTTTTTAACTACAAAAAGATAGATATCACTAATTTTAAGTAACTTCAACGAAG
GAAAAAACAAACAAATTAACTAAGCTCAGCAAACTTGATTAAAGCCTTTCATAATTGGCCTCAAGGCACAAGAATGTATCTTGTGTTTTCTTATTCATAA
CTCATGAGGCACTACAGACTAGGGCTGAATTGTTATACACAACACTTGCAGTATAACTAAAGGCTAATCTAAACTTTTGCAACAAAGATAATCTAATTTT
TCACAACAAAGAGAAGAAAACAAAGGGTATTACTCTGACCTCAAAAGTATCAAAATATTTAAGTAATTTGTCATGCCTGCTAATACGAAATTTTACGTCA
ACAAGCTAGATGAATTCCACCAGATATATACTACTATCTCTCCTTTTCAGAAACAGAAACACACACACATTACAAACTACTAACAAGAAGTTTAGAAATA
AGCACATCTAAACATGCAGTAATATACATTTCTTGTTTTAATGGAATAAAGGTCGCTCCACATAAAACATTAAAATATAAAAAACATAAATATCCCTCAA
GAACAGGAAATTTACAGTCTTTCAGCAAACAGGCACATAAAATGTGAACTTAAACCAAATAAAGATTCAGAAATTTTTAACAGGGCTCAATGCCCTAGAA
CACACCACCACAATTCAAAAACCACCACGTAGACGAAGAACAAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCCATCCTCCA
ACTGCTTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCCTCTTTGTCCTGGATTTTCGCCTTCACATTATCAATTGTATCTGAGCTCTCAAC
CTCCAAGGTAATTGTCTTTCCAGTAAGCGTCTTGACAAAGATTTGCATGCCACCACGTAGACGGAGCACCAAATGAAGGGTCGATTCCTTCTGGATGTTG
TAGTCAGCAAGGGTGCGACCGTCTTCCAGCTGCTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCTTTAA
CATTATCAATAGTGTCAGAGCTTTCAACTTCTAGGGTGATGGTCTTTCCAGTAAGTGTCTTAACAAAGATCTGCATGCCACCACGTAGACGAAGAACCAA
ATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCTAAGGTACGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATA
CCTTCTTTGTCTTGAATCTTAGCCTTGACATTGTCAATGGTGTCCGAGCTTTCTACCTCAAGAGTGATGGTCTTCCCAGTAAGAGTTTTCACAAAGATCT
GCATCTGTTGTTAAGGCAAGACCAACAAGGAAATTAATTTACCACACAAAAAACAAAGTTCAAGTAACCTTCACAGGATTAAAACACTTGCATAACCATG
AAAAATATACAAAAAAACATATAACGATCAAAGAGAAAATCCACACAAACACATCAACTCGTGGGGTGAAATCCAATTATGCTCGTCTTATCAACATCAT
TCCAAATATGTTGGACATGAATGGTTATCCTTAAGTAATTGCAAACTAAGTAGTTGCAAACTACATAACCTTAATTCAAATCAATAATCCAAATAATCAC
TATACCAATTGCATCTCAATTACCCTACTACGATTTCTATTATACCACAGTTATAACGTCAATCCCTAATTATCACACTTAGTCGTATTAAGAGACTTAG
ATTAGACATCCTATTAATCCGTTTCAGCAAACAAACAATCCTCACAACAAAAAAAACCAGAACAACTCCTCAACAAATCACAAAAGCTAACACCACAAGA
CATCATACTAAACACCGATACGAAAAGGAACATAAATCTTGATCATCGTTCATCATAAAAGGATAAACTAATAACCTTCAACTGGAATCCTCTGATTTTC
TAGTTTCAATGTATATGCACAAACTTCGTTCAACAATGATCATAAACCCTAAAATCATACCATTAAATTATAAACAAACCCTAAAATCAAACCGAAAATT
TATAATTTCAACAAATTAAAAAGCGCACACCTACTAGTCCAATTACGTTTATTATTTTATGATTAAACAAATCCCATATCCATACCGTCCTTAACAAAGT
TCGAACCTCCACATACAATTAGACGAAGATCATTTTTCAATCTCTCACAACGACAACAAACCAATACAATCAAATAAAACACAATAGATCTAATCAAACG
CTACCGATTACAAATTATACAAATCAAATACGAAGATCTAATTACACAGCTGGACATCTTGTATTATCATCACAATTCACAAAAACATAACTGAGTACAC
ATAGAAAAGGAGAATTAAATACGTACCTTGAAAATCGTTGATCAAAACAAAAGAGAGAGAATTATGTATGAATATAAGGGTTTGAAAATTGTTTAAGAAC
AAAT