CANTATAdb - search

Detailed information on CNT30626099

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH32|UBQ4_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-168

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30500417	Daucus carota	Coffea canephora	36.62	56.75	82.59	1143	forward
CNT30401729	Daucus carota	Beta vulgaris	36.27	82.63	81.18	1132	forward
CNT3097291	Daucus carota	Solanum tuberosum	36.49	73.96	83.58	1139	forward
CNT30120117	Daucus carota	Citrus clementina	21.72	99.85	83.63	678	forward

Expression of CNT30626099

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHYSKHNYIIRQQNKLNILHRNILNYKWPI*

>peptide 2 (39 aa)
MGTERQERDREREIYRDLCVCLGLFVETICEMRNWGRGG*

>peptide 3 (70 aa)
MSSQKSAFHPSASVPNGVWIPSEYCNQPMSFHPPTACQQKSTSAGPGGFLPCLGFLPSHCQLYPNFLLQG*

>peptide 4 (79 aa)
MECGFLLNIVISQCPSILQLLASKNQPLLVRGDSFLVLDFCLHIVNCIRTFYFKGDCLPCEGLDKDLHTTTQAEHQMKG*

Sequence

>CNT30626099
CTGTTACCTGATTGCAAGTCTTAGTTCTCTTAATTGAGTACAAGTTTTTATGATCCAGTTCCAAATTAACATCGAGTACGATTATAAATTAGCCATTCAA
CCCCAGCAAGTTAAAGTGAAATGTTAAATCTGACTGTTCAAGCTTGTGCGGAAATTGGGGACAGTTTTTGTATCGTCTGATATTTCAATTACGTTGGAAA
CGTTTGGTTTTTTTAAAAGAAATCACTTTTCGGACAACTTTATTTTCCTACAACTGTTTGTTATCTCTTTCATTCTTGCTTATTTACATCAGAAACGTTT
GGTTTTTAACAAAGCACCAAACACAGGAAGCGAGGGCGGAAATGCAAGGCATGAACATATAGAAACCCTCCTAGGCTCCTACTATAGATACGTACTAGTA
TACAGATTTACATTTCCTTGGTAGTTTCTCAAGTCTTGATCGAGTTCTAGGAGTGCTTAATCTGGTCAGAAGCATAGGATCTACAGCCCAGAACTAACAC
TAAACTGATCAAAATCAGTTGAGTCAGAAGCATAGGATCTACTATCTAGAGCCCTGCACCAAACTGATCAAAATCACTCCTTTTAGTAGGCTACTACGAA
AATAAACTCGTAATTAACCACAAGGAATAACCAGGCATTTAGTAATTTACGCTCTATATGTTATACTCAGAAATAAGAATTTAAACACATTCCAAACTAG
ATATAACAATAGTCTTTCAACAGATAACACAACTGCTTTAATAAAACCCAGACATTCCACATAGAAATATTCAAGTAAATGTAAAAAAGAGAATCGCATC
AAAGACAAGCCAAGAACTTTCCACAGTTCAGAAAACAGAACCACCACGAAGACGAAGGACAAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCGGCC
AAAGTCCTTCCATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGGATGCCCTCTTTGTCCTGAATCTTCGCCTTCACATTATCAA
TCGTGTCCGAGCTTTCAACTTCTAGAGTGATCGTCTTCCCAGTCAACGTCTTGACAAAGATCTGCATCCCACCTCTAAGACGGAGCACCAAGTGGAGGGT
AGATTCTTTCTGAATATTGTAGTCAGCAAGGGTACGACCATCCTCAAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATGCCTTCTTTA
TCCTGAATTTTTGCCTTCACATTATCAATTGTGTCTGAGCTCTCCACCTCCAAAGTAATTGTCTTTCCTGTCAATGTCTTCACAAAAATCTGCATTCCAC
CCCTCAGCCTCAGTACCAAATGGAGTGTGGATTCCTTCTGAATATTGTAATCAGCCAATGTCCTTCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCT
CTGCTGGTCCGGGGGGATTCCTTCCTTGTCTTGGATTTTTGCCTTCACATTGTCAATTGTATCCGAACTTTCTACTTCAAGGGTGATTGTCTTCCCTGTG
AGGGTCTTGACAAAGATTTGCATACCACCACGCAGGCGGAGCACCAAATGAAGGGTTGACTCCTTCTGGATGTTATAGTCAGCAAGAGTACGGCCGTCTT
CAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTC
AACTTCTAAGGTAATGGTCTTGCCAGTGAGTGTTTTAACAAAGATCTGCATGCCACCGCGGAGACGAAGAACCAAATGAAGGGTGGATTCCTTCTGAATA
TTATAGTCAGCTAAAGTCCTTCCATCCTCGAGCTGTTTGCCCGCAAAGATAAGCCTCTGCTGATCGGGAGGGATGCCTTCCTTGTCTTGAATCTTAGCCT
TGACATTGTCGATTGTGTCAGAGCTTTCAACCTCAAGGGTTATGGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCATCTGTTATCCACGCAAAACCAA
TAAGAAAATTAGCTTCAACTAATCCGATAAAGGGCTAGAGCCCTATATTAAAACAACCCACAGTATATATGCATTATTCCAAACATAATTATATCATTCG
ACAGCAAAACAAACTTAATATCCTACATAGAAACATCTTGAACTACAAATGGCCAATATAAACTACAGCGATTCATATATAATCACATACGACTTGAATA
TCCACGATTACAATTTTCTCAATCCAACAACCTAATGCATGTATACAATTATTATGTTCTGAGTTTATGCCGAACGTTCAACACCGATGAACAAATCAAC
ACAATAGGTTAGATAGAAATCGATAGCAATTGTCTATGATCAAAATCATCAAAAAATTATTATGTTCAAGTTTATCTCGAACATCTAACACTGACGAACA
AATTGACACAATAGATTAAATAGAAATCAATAACTGCCACCATCAATGATCAAAATCATCAATAAGTTATACATAATAAAGAACTAATATAAATCGAAAC
AATAGATTAGATAGAAATCAATAACCGTCATGATCAAAATCATCAAAATATTATACAGAATAAAGAACTAATATAAATCGACACAATAAATTAGATAGAA
ATCGATAACCATCATCTATGATCAAAATCATCGAAATATTATACAGAATAAAGAACTAAACATCATTAAACACGCAACGAATTCAACTGATATACAAAGC
ATAAAAATCAAAACAATCGAATGATTATAATATTATACACGCAGCACAGATCGATACGTACGCAGATCAATTATATATCTCTATAATCGATGACAAAGAG
GCAAGATAAAAAGTGTAGATGTTGAAGAATTATACCTTGAAATATGGGGACTGAGCGTCAAGAGAGAGATCGAGAAAGAGAAATCTATAGAGATTTGTGT
GTATGTCTAGGGCTTTTTGTGGAGACAATATGTGAGATGAGAAATTGGGGAAGAGGGGGTTGAATTTATACAGGGGTGTTCTTGACCCGACCCGGCACTA
GAAGCTTCTTGTATCAACGCGTAATGACCCGAAGATAGATGTATTCTCAAGTCAAATGGGCTACGCAACCTAGCCCACAAGGCACGGCCACGGACCGACT
TGTTTTGAAATTTTCTAACTT