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Detailed information on CNT30626039


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201820Daucus carotaPisum sativum12.3128.7588.2161reverse complement

Expression of CNT30626039

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLCNIYLLNLVSSQIGNPEFQERLNPSLYSSQIIRTLS*

>peptide 2 (87 aa)
TNKGRRIIPILLLYYIKFYLDIKFIILLSNSKGLHCSKSFHNLTVFNCSLTPLEIFDKFTLFLSVSKENFDKSSLCTIQTYLHCSCM*

Sequence

>CNT30626039
CACAAACAAAGGGAGGAGAATTATTCCGATACTCCTACTATATTATATTAAATTTTATTTAGATATCAAATTTATAATACTGCTTTCTAACTCAAAAGGC
TTACATTGTTCTAAAAGTTTCCACAATCTAACAGTTTTTAACTGTTCTTTAACTCCTTTAGAAATATTTGACAAATTCACTCTCTTTCTTTCGGTCTCCA
AAGAAAATTTTGACAAATCATCTCTCTGCACCATCCAAACTTACCTCCACTGTTCGTGTATGTAGGCACAAGATGAGGTACTTCAGGGTAGGCCACAATA
ATTCAGTAGGATAATGTATGAATGTATGTGCTGGCAGTGAGAAGAGGAAAAGAGGGTGGTGAGAGATAATTAGTCATTTTTGTTTTACCTTCTTTCTTCT
TATGGTAAAAACTGGCCTCTCTAAAGTTCAGACTAGTGTTAAACTATTTTCTCATTGAAGTGAGGAAACCTCTTTTTGACTCTGACTCTCCCACTACAGT
TGTTTTTCTCTCTATTACTTCGAAAGTAGCTACTTCAGCTTCCCCAATCAAATTTCTGATATTCCTTTATATTTCTCATCGAACGAATGGCATCTTCTTC
AGGAAACCCTAGCCCTTGCTAAAAATCCTAAGGTTGTGGTTGGCTAAGAGGGCCTACTTGGAGGCTTGGGATTTTAGCAGAAAAATTCTGCTACTTCGAA
AGTAGCCACTCAAATTTTTGATATTCCTTATTATTTCTCATCAAATGAATGGCGTCTTCTTGTGGAAACCCTGGCTATTCGTAGCATGATATTGGGGAAT
CTTCTCTGAAATCTACTTGCCTGGTTATGCTCTGTAATATATACTTGCTAAATCTGGTATCCTCACAAATAGGAAATCCAGAGTTTCAAGAGAGATTGAA
CCCAAGTCTCTACTCTTCTCAAATCATAAGAACGTTATCATGAGAAATTGCAGGTCCTGTTCTCGGCATGACCACTTTGTTAGGTATCAGTCAATTACAA
TGGTAGCATGAGTTTGGCTGATCCAAGATATATATCGGTTATAATTGTATGTTTAGAAAATTATTATAAAAAGTATGTCTTGGTCACAAAATAAGGGGAG
GATTGTTGAGTAGCAATCAATATGAATTGGATTCTGATTTGAGTTAAAAATTTCAGAATTGGACTTTAATTAGAATTAGATATTTCAGAATTAGATTTTG
ATTTAGCTAAGTTTGAGATGATTATATATAGTATATACATAGTCGTATTACTTTGTTATGTGTGATCAAGATGTAGACTTAGTGGGCTGGGCGGATCTTT
GAGTATTG