CANTATAdb - search

Detailed information on CNT30626002

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3021612	Daucus carota	Citrullus lanatus	16.16	47.29	97.92	96	forward

Expression of CNT30626002

Peptides detected in this lncRNA

>peptide 1 (35 aa)
AHTNIVYMYICCLNSRTRRFSSKFIVIYFIALFCI*

>peptide 2 (50 aa)
PYEYSLHVHMLLKQSNSPILVKIYCNLFHSVILHLSFSSKCQSFSQFLFH*

Sequence

>CNT30626002
GCCCATACGAATATAGTTTACATGTACATATGTTGCTTAAACAGTCGAACTCGCCGATTCTCGTCAAAATTTATTGTAATCTATTTCATAGCGTTATTCT
GCATTTGAGTTTTTCTTCCAAGTGCCAAAGCTTTTCCCAGTTTCTTTTTCACTGATCACTTGCCATTTCCAACTGCATTCTTTGGGATAGTTTGTTCAGT
GCTCAGTAACCATTCCCAGTTACAAGTTGCATTGCCTTCTTTCTTAAACCTTGTTCAAGTAAATAAGCACTGATGCCTTTATAAAATCAACAGGTATCCC
CGCATATATAATTCAACTCTCAAAAGCCATCAATTGCCAGCTTTCACACATTTTACGCTCATAGAAATACAATCATCGATCATATATCATATACAAGGGT
GTTCCCTAGCAACCACCCTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAGCTTCCTTGACCGATTGGGTAGA
TCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGCATACCTAGACGGAAACTAAGCTCCCTCTCTCT