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Detailed information on CNT30625880


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-148

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516063Daucus carotaJuglans regia75.592.3183.33912forward
CNT3069548Daucus carotaQuercus suber50.6686.284.8612forward
CNT30379426Daucus carotaManihot esculenta75.0878.3284.12907forward
CNT30642514Daucus carotaCannabis sativa73.4380.283.2887forward
CNT30330398Daucus carotaDioscorea rotundata75.1796.782.16908forward
CNT30724005Daucus carotaLupinus angustifolius74.569.7182.44900forward

Expression of CNT30625880

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MKSGFLLNVVICQGPSVLQLLPSKYQPLLIWRNSLLVLDLCLNIVDRIGALYFQGDCLSSKGLDKDLHSTT*

>peptide 2 (43 aa)
NTNTKTHYKLLTRSLEISTSKHAVIYISCFNGIKVIPHKNIEI*

>peptide 3 (53 aa)
MEGRLFLNIVVCKCAAIFKLFSSKYKPLLVWWDALFVLNLCFDIINSVGALHL*

Sequence

>CNT30625880
AAACACAAACACAAAAACACATTACAAATTACTAACAAGAAGTTTAGAAATAAGCACATCTAAACATGCAGTAATATACATTTCTTGTTTTAATGGAATA
AAGGTCATTCCACATAAAAACATTGAAATATAAAAAACTTAAATATCCCTCAAGAACAGGAAATGTACTGTCTTTCAGCACACAGGCACATAAAATGTAA
ACTTAAATAAAACAAAGATTCAGAAATTTTTAGCAGGGCTCAAAGCCCTAGAACACACCACCACAATTCAAAAACCACCACGAAGACGAAGAACGAGGTG
AAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTTCTTCCATCCTCCAACTGCTTTCCAGCAAAAATCAAACGCTGTTGATCTGGTGGGATTCCC
TCTTTGTCCTGGATTTTCGCCTTCACGTTATCAATTGTATCTGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCGGTCAATGTCTTCACAAAGATTTGCA
TCCCCCCACGGAGACGGAGCACAAGATGGAGGGTAGACTCTTTTTGAATATTGTAGTCTGCAAGTGTGCGGCCATCTTCAAGTTGTTTTCCAGCAAATAT
AAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGAATCTTTGCTTTGACATTATCAATAGTGTCGGAGCTCTCCACCTCTAGCGTGATGGTCTTT
CCTGTCAAAGTCTTCACAAAAATCTGCATTCCACCCCTCAGCCTCAATACCAAATGAAGAGTGGATTCCTTCTGAATGTTGTAATCTGCCAAGGTCCTTC
CGTCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTTGCCTTAACATTGTCGATCGTATCGGA
GCTCTCTACTTCCAAGGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAGATTTGCATTCCACCACGTAGACGGAGCACCAAATGAAGGGTTGATTCCTTC
TGGATATTGTAGTCAGCAAGGGTGCGACCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAATCT
TAGCCTTGACATTGTCAATGGTGTCTGAGCTTTCTACCTCAAGAGTGATGGTCTTCCCGGTAAGAGTCTTCACAAAGATCTGCATCTGTTGTTAAGGCAA
GACCAACA