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Detailed information on CNT30625853


BLAST search results

BLAST vs Swiss-Prot:
sp|O22647|RS16_FRIAG, E-value = 3e-89

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517680Daucus carotaJuglans regia32.0928.2879.13412forward
CNT30378107Daucus carotaArabidopsis thaliana8.8834.7687.72114forward
CNT30615807Daucus carotaSesamum indicum7.6344.7582.6598forward
CNT3043803Daucus carotaPrunus dulcis9.9724.4380.47128forward
CNT30568235Daucus carotaActinidia chinensis15.5866.8985.5200forward
CNT3083687Daucus carotaVigna radiata32.2443.5380.68414forward
CNT30721366Daucus carotaTriticum spelta11.0627.6380.28142forward
CNT30431542Daucus carotaPapaver somniferum14.9523.1380.73192forward
CNT30120766Daucus carotaCitrus clementina15.1936.0481.03195forward
CNT30176592Daucus carotaVigna angularis32.2450.880.92414forward

Expression of CNT30625853

Peptides detected in this lncRNA

>peptide 1 (48 aa)
SSPAANQNKNSTKITMYKFNSGLQFFSLNTPEFINAGNQSFRKLRYIS*

>peptide 2 (31 aa)
MHNNVLCTNKIPAIYKLYQCTITTNQLRPNK*

>peptide 3 (31 aa)
MHHNNQSTQTEQIIKRYYQIASIRNIETEYS*

Sequence

>CNT30625853
CTCCTCTCCTGCTGCAAATCAGAACAAGAACTCAACCAAAATAACCATGTATAAGTTTAATTCGGGACTTCAATTTTTTAGTTTGAACACGCCTGAATTT
ATTAATGCAGGTAATCAATCTTTCAGAAAACTCAGATATATAAGCTGAACTTTAACATTTACACCTTGCAGAATAAGCTCACGCCAGAAACAAAACACAA
GCATACAAGTACTACCAAATCACGTCCAAAACAAAAATCAAAAGGAGAGATTTCACAAAACTAAATAATTTCTTGAACCATCATAATAGCACAACAAAAA
GTCCAGTATTTATAATATAAGTCCTAAAACCACATTTCGACGGTTCCACGCTAATTAGCTCCAAGAGCATCATGCATAATAATGTACTATGCACAAATAA
AATCCCAGCAATATATAAGTTATACCAATGCACCATAACAACCAATCAACTCAGACCGAACAAATAATCAAAAGATACTACCAAATCGCATCGATAAGAA
ATATTGAAACCGAGTATTCATAAACTTAAATATCCAAAACATCGAAACCACATTCTAAAATAACATTTCATTGTAGGTCCACAACGCCAAAAAAACACGA
AACATAACAATAATAATAATAATAATAATAACCGAAAACAAAGTTCCGATACTACCAAACACGAAAAGCGCTCAACGATACGACTTCTGGAACCTAGCAC
GAGCACCACGCCCACCAAACTTCTTGGGCTCGCATCTTCTAGGATCAGCCACAAGCAAAGTCCTGTCATACCTAACCAGAATATCCTTGATCTCCTTCTT
CGACTCCTCATCAACGAACTTCTGGTAATACGCAACTAGCGCCTTCGCAATACTCTGACGAATGGCGTAGATTTGAGAAGTGTGACCGCCTCCTTTGACG
CGGATCCTCATGTCGACGCCGGCGAAGCGGTGGCGGCCGAGGAGGAGGATCGGCTCGAAGGCTTTGTAACGGAGGATCTCGGGCTGAACCAGCTCGATTG
GGACGCCGTTGATTTTGATTAGGCCACGGCCGCGCTTGCAGTGAGTGACGGCAACGGCGGTCTTTTTACGGCCGAAGCATTGGACGGATTCCGGTGGTGC
TGTCGCCATTGTTTAGGGAGTTATTTGTTTTGATCTCCGCCGCTTTGAGTATTTGAAACCCTAGAAGGAGGAAGAAGAGCGACAGCTTGTTTATTTAAAC
TTGGATTTAGGGTTTTGGTGAGGTATTCACATGAGGCCTCATAATTGGGCCTGTTTCTTTTTTTTATCAAATGTGGGCCTATAG