Detailed information on CNT30625785


BLAST search results

BLAST vs Swiss-Prot:
sp|Q75KD7|AOC_ORYSJ, E-value = 5e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317088Daucus carotaCorylus avellana32.7729.2780.84214forward
CNT30703802Daucus carotaQuercus lobata21.4411.2583.57140forward
CNT30616476Daucus carotaSesamum indicum28.0236.981.42183forward
CNT30628673Daucus carotaVigna unguiculata8.1224.6590.5753forward
CNT3061078Daucus carotaArabidopsis lyrata20.2117.6582.58132forward
CNT30153443Daucus carotaPrunus persica10.8731.1487.3271forward
CNT30112524Daucus carotaFicus carica28.1810.7983.15184forward

Expression of CNT30625785

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSPHNDHLSFPVHSGSERIVLLLFPHVSASLRNEIAQGIDGFLA*

>peptide 2 (37 aa)
MVAPGSHALAAAVGSTAGDGATAAPSNSSGKSGMPFK*

>peptide 3 (37 aa)
MPWQPRWAPLQATEPLQHQATPLANLVCLSSRKCRTT*

Sequence

>CNT30625785
TCTGTCCTGGGTAACATCCCCAAAATTTCATATGGATCAAACAGTAAACCAATTTATTTAACCACCAAAATAATTAGTTTACACTGAATCTAAAATCTTT
AACCACCACTTCTAACTTTTTCCATACAAAATCTTCTCAACAACCTAAAAATTAACCTCAGCACTTAGGCGACCAAGAATGGTGGCGCCAGGCTCACATG
CCTTGGCAGCCGCGGTGGGCTCCACTGCAGGCGACGGAGCCACTGCAGCACCAAGCAACTCCTCTGGCAAATCTGGTATGCCTTTCAAGTAGAAAGTGTA
GAACAACTTAAAGGGAAATATCAGCTGTTGTAGCTTCACCTGTCCATACACTCCTTCGAAAATGCCAGAGCCACCAGTGACAGCGAGGTAAGTGTCCTCG
TAAGTTAAGTACTGTCCCTGCACACATATGTGACCATAGTCTCCAAAGTAGAAGCTGAATGTCGCCTCATAACGATCACCTTTCTTTTCCGGTACATTCT
GGATCAGAACGCATAGTCCTGCTGTTATTCCCACACGTTTCTGCAAGTCTCCGGAACGAGATCGCCCAAGGAATTGACGGATTTCTGGCTTAGACGAAGA
TAGGCAGGGCTGCCACGGTCTCTCTCGTTGATTTCATAGACACACAGTTGTTG