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Detailed information on CNT30625720


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 4e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500604Daucus carotaCoffea canephora17.2432.0381.73197forward
CNT3042435Daucus carotaPrunus dulcis21.1734.9780.58242forward
CNT3091337Daucus carotaSolanum tuberosum21.5230.1582.11246forward
CNT30154791Daucus carotaPrunus persica25.6337.7180.55293forward

Expression of CNT30625720

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MLVSWGYNQVKQGYTQERRGCTQERQGCTQERRGCTQVKRGYNLEKMQEKIPCHQHREKIVHQ*

>peptide 2 (74 aa)
MMEKLDCMKVRLGCMMGRLGCRTGSSGCRTERSGCRMERWGCRTERWGCKQVRWGCRQVRWGCSLGRWGCSWGR*

>peptide 3 (37 aa)
MIWGARDWRPGWSHAKVQTVHVTRKLNVNSLFQHLLI*

>peptide 4 (34 aa)
MSDCTGWMVIVLDCSGNMPGRGCTLQMKGCSLEM*

Sequence

>CNT30625720
AATTCATCACATAGAACACTTCTAAACAGGAAAATTAAACATTCGGGAAATAAAAGTGTCATCTCTTGCCTGTAACTGGGGGATGTCGGACTGTACGGGC
TGGATGGTGATAGTCTTGGACTGCTCGGGGAATATGCCAGGGAGGGGCTGTACTTTGCAGATGAAGGGTTGTAGCTTGGAGATGTAGGACTATAGCTTGG
AGATGTGGGACTGTAGCTCGGCGATGTGGGACTGTATGCAGGAGAAGTAGGACTATATGATGGAGAAGTTGGACTGTATGAAGGTGAGGTTGGGCTGTAT
GATGGGGAGGTTGGGCTGTAGGACGGGGAGCTCGGGCTGTAGGACGGAGAGGTCGGGCTGTAGGATGGAGAGGTGGGGCTGTAGGACGGAGAGGTGGGGC
TGTAAGCAGGTGAGGTGGGGCTGTAGGCAGGTGAGGTGGGGCTGTAGCTTGGGGAGGTGGGGCTGTAGCTGGGGGAGGTAGGGGAGTAGGATGGACTTGT
CGGTGAATATGTAGGGCTACTAGGACTATATCCTGGAGAGCTTGGACTATATGTTGGTGAGCTGGGGCTATAACCAGGTGAAGCAGGGCTATACCCAGGA
GAGGCGGGGCTGTACCCAGGAGAGGCAGGGCTGTACCCAGGAGAGGAGGGGCTGTACCCAGGTGAAGAGGGGCTATAACTTGGAGAAGATGCAGGAGAAA
ATCCCATGCCACCAACATAGGGAGAAAATTGTGCATCAGTAATGGGTGACAGCCGAAGGTTTGGGCTTAGCATGTAGTTTGGTGACATCATTCCATCATG
ATATGGGGTGCCCGAGATTGGCGACCGGGCTGGAGTCATGCCAAAGTCCAGACCGTCCATGTAACTAGGAAGCTGAATGTCAATAGCTTGTTTCAACATC
TTCTCATTTAAATACAAAGAACAGTCTCCAGTGCCAATTGGTGCCAGTTGACCCAACATGATATTTTCAGTAACACCTCTCAGGTAATCTGTTTCTGCAT
AAACTGCAGCATCAAGGAGAATGTCAACTGTTTCCTCAAATGAACATCTCATCATTGGACCTGTGTCATTCCTATTAATTCCATGACGAGTGATGGCCAT
CAGGTGACCACGGTATGTCATGGTATCGCAGAGGATAGCCAAG