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Detailed information on CNT30625449


BLAST search results

BLAST vs Swiss-Prot:
sp|P15192|CB22_PINSY, E-value = 5e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701193Daucus carotaQuercus lobata33.3724.3884.69307forward
CNT30500934Daucus carotaCoffea canephora30.1117.2783.03277forward
CNT30616538Daucus carotaSesamum indicum2037.4783.7184forward
CNT3070976Daucus carotaQuercus suber33.4860.6383.44308forward
CNT30378910Daucus carotaManihot esculenta58.2646.2580.6536forward
CNT30526271Daucus carotaPhaseolus vulgaris18.5925.6884.8171forward
CNT30631012Daucus carotaVigna unguiculata31.9623.1582.99294forward
CNT30708353Daucus carotaGlycine max22.7226.3983.25209forward
CNT30561789Daucus carotaActinidia chinensis21.4117.6888.32197forward
CNT30172025Daucus carotaTrifolium pratense30.5424.3582.21281forward
CNT30311404Daucus carotaCamelina sativa31.5244.1481.72290forward
CNT3074412Daucus carotaBrassica juncea21.0932.4485.05194forward
CNT30264220Daucus carotaBrassica rapa33.3738.0981.43307forward
CNT30612591Daucus carotaArabis alpina32.0736.9780295forward
CNT30605018Daucus carotaGossypium raimondii25.3336.6986.27233forward
CNT30204126Daucus carotaHelianthus annuus25.6546.0982.63236forward
CNT30480205Daucus carotaArabidopsis halleri21.4126.0982.23197forward
CNT30410959Daucus carotaPapaver somniferum31.332.482.29288forward
CNT30326027Daucus carotaAsparagus officinalis23.738.3185.32218forward
CNT30119335Daucus carotaCitrus clementina21.0929.4886.08194forward
CNT30723501Daucus carotaLupinus angustifolius33.0428.1582.57304forward

Expression of CNT30625449

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLQDHQPNQEGQKPLLGKARRVPHQEDLLQLCILQLVP*

Sequence

>CNT30625449
CATCCTGGCTGATTTTATAAATTTGAAAAGAGGTAAAATCTAGGCTCATAGTAGTCGTTGAGATATGTTATAATTTTTGCAGGTTTGAATGAGTTCTGCT
GATATCCATCTCTAGCATTGGTGAAAGAATATTATTGTTGCAACCTAATAATCTAAGTGACAACAGGTATACCAGAAATACATATTCCACTCAGCTATAT
TAGCAATATCCGCGAGGATCAAACAGATTGAGTACAGAACTTGAATGTCACAAAACAAGTACAATTTTACAGCTGAGCAATAAAAGTTACATATTTTCAC
TTTCCAGGAACAAAGTTGGTGGCGAAAGCCCAGGCATTGTTGGCAACAGGGTCGGCTACATGGTCATAAAGGTTCTCAATTGGACCCTTTCCGGTAACAA
TAGCCTGGACAAAGAATCCAAACATTGAAAACATTGCTAGTCTTCCATTCTTGACCTCCTTTACCTTCAACTCTGGGAATGCTTCAGGATCATCAGCCAA
ACCAAGAGGGTCAAAAGCCCCTCCTGGGTAAAGCGCGTCGAGTCCCTCACCAAGAGGACCTCCTCCAACTCTGTATCCTTCAATTAGTCCCATGAGCACA
ACCTGAGTTCGGGTTGCCAAGATAGTCAAGGCCTCCTTCAGAAAAGATTTGGGATCCGGCCTTGAACCACACAGCCTCGCCAAATGTGACTCCGTTCTTG
GAAAGGATTTCAGGGAAAACACAGCCTAGTGCTCCCAACATAGCCCATCTGCAGTGGATCACCTCGAGCTCACGGTTCTTGGCAAAGGTCTCGGGGTCAG
CTGAGAGCCCGGCAGTGTCCCATCCATATTTTGGATCGCAGAGGTGGCCATGTTTGTATTTTATTTTATAGATATACAAAAGGCTTTCTTAGTGTGAGGA
AGAAGCTTAGTGCAGGGATG