Detailed information on CNT30625213


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317675Daucus carotaCorylus avellana13.226.3994.3771forward
CNT30544783Daucus carotaBrassica napus13.3822.593.0672forward
CNT30309275Daucus carotaCamelina sativa13.5732.5991.7873forward
CNT30261820Daucus carotaBrassica rapa13.382393.0672forward
CNT30429165Daucus carotaPapaver somniferum13.5720.5697.2673forward
CNT30115210Daucus carotaEutrema salsugineum13.228.8692.9671forward

Expression of CNT30625213

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MVQGSVRGSFLKLLATDSAFGFLVSRMNFCLVWFSYYNLDRIMILGFKE*

Sequence

>CNT30625213
CACGTTAGAAGCCCACAAAAGCCCTAAGGAATTAGGGTTATGACGCAGCTGTAGAGTCGTATAAATACTAAACAAGAGTCTCAGGAAACACAACATCGTC
TGTAGAACGGCCGAGAGATATACAAGACACAGAGCATAGAGAGTTAACACAGAAGTTCTCTCGAGATGCGTGCTAAGTGGAAGAAGAAGCGGATGAGGAG
ATTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCTAAGTAGACGGTTTGCAGAAATAATTAGATTGCTTCTTTCGAGCCTGCATCTTCATAATCACTA
TGTTGAATGGTTCAAGGCTCGGTTAGGGGGAGCTTTCTGAAATTGCTAGCAACTGATTCAGCTTTTGGTTTTCTTGTTTCTAGAATGAACTTCTGTTTAG
TTTGGTTTTCTTACTATAATCTTGACAGGATTATGATACTTGGCTTTAAGGAATAATCTTTTTTAATTATCTGATTTCATTTTATGAATTCATATTTTAC
CATTGTTAGTTTACTTCCTCCATGATCTGGTTAATTCT