Detailed information on CNT30625119


BLAST search results

BLAST vs Swiss-Prot:
sp|P30567|CATA2_GOSHI, E-value = 1e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501026Daucus carotaCoffea canephora33.739.381.69142forward
CNT30281433Daucus carotaChenopodium quinoa26.8410.9281.42113forward
CNT30348304Daucus carotaEragrostis tef20.1931.4883.5385forward
CNT30574555Daucus carotaVitis vinifera47.5124.1881200forward
CNT3051687Daucus carotaAmborella trichopoda32.546.0782.48137forward

Expression of CNT30625119

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MHGSRRGTSLRHAQRRQESCFPQDQSYPE

>peptide 2 (36 aa)
MWDLGLGLNAWITSGNFIASRTKKTGKLFPTRSKLP*

Sequence

>CNT30625119
GGGTCCATGGTCTGAATGAATAGCTTCCACTCGGGATAATTTCCTGCTGCAATCGAGTCATACAGATCTTGAGTGGCATGGCTGTGATTAGTACCTCCTA
CTCTGATGGCTTCTTCCTCTAATAAGTTCTTCACTCCACAAGTAGGCCTCCAGTGAAACTTAACATAGAAGAGTAAAAGTGTGAACTCCAGAGCCATCCA
TGTGCCTGTAATCTTGTGGAACACCAATGTCATCATAGAAGAAAGCAAATGTGTGCAGACTCTCTGGGTGGTGGGACAAGAAGTCCATAATTCTCCAGTT
TTCCTGAATGTGGGACTTGGGATTGGGCTTAAATGCATGGATCACGTCGGGGAACTTCATTGCGTCACGCACAAAGAAGACAGGAAAGTTGTTTCCCACA
AGATCAAAGTTACCCTGAAAA