Detailed information on CNT30624959


BLAST search results

BLAST vs Swiss-Prot:
sp|P34823|EF1A2_DAUCA, E-value = 1e-72

BLAST vs NONCODE:
NONMEST004097, E-value = 9e-69

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678319Daucus carotaSetaria viridis98.2454.485.33334forward
CNT30639730Daucus carotaNymphaea colorata90.8833.6283.17309forward
CNT30518094Daucus carotaJuglans regia95.8834.8384.36326forward
CNT30618435Daucus carotaSesamum indicum81.7656.6284.89278forward
CNT30274113Daucus carotaChenopodium quinoa84.4145.9982.93287forward
CNT3021028Daucus carotaCitrullus lanatus99.7127.2983.48339forward
CNT30727585Daucus carotaCorchorus capsularis97.9424.785.89333forward
CNT30525464Daucus carotaPhaseolus vulgaris96.7658.2386.02329forward
CNT30629544Daucus carotaVigna unguiculata96.7643.5286.93329forward
CNT30505987Daucus carotaNicotiana attenuata64.1266.2683.94218forward
CNT30224987Daucus carotaHordeum vulgare81.7694.2485.25278forward
CNT30564256Daucus carotaActinidia chinensis89.7126.285.57305forward
CNT30588666Daucus carotaMusa acuminata75.8853.0983.33258forward
CNT3084119Daucus carotaVigna radiata95.8818.3184.66326forward
CNT30234068Daucus carotaBrassica oleracea87.3562.9283.16297forward
CNT30509820Daucus carotaSolanum lycopersicum65.8810086.61224forward
CNT3059440Daucus carotaArabidopsis lyrata96.7654.8384.19329forward
CNT30598511Daucus carotaFraxinus excelsior78.2440.8686.84266forward
CNT3015866Daucus carotaZea mays96.7645.8286.02329forward
CNT30608730Daucus carotaGossypium raimondii78.8244.6785.45268forward
CNT30651330Daucus carotaRosa chinensis46.7636.0586.79159forward
CNT30127375Daucus carotaCorymbia citriodora91.1855.5686.45310forward
CNT30685098Daucus carotaTriticum urartu98.8222.8685.71336forward
CNT30480841Daucus carotaArabidopsis halleri10054.7582.35340forward
CNT30355521Daucus carotaLactuca sativa98.2435.0185.03334forward
CNT30151899Daucus carotaPrunus persica97.6530.184.04332forward
CNT30424546Daucus carotaPapaver somniferum10028.7985.29340forward
CNT3052982Daucus carotaAmborella trichopoda86.7622.5585.42295forward
CNT3024315Daucus carotaPopulus trichocarpa89.7139.9782.95305forward
CNT3037774Daucus carotaCucumis melo98.8243.4783.63336forward
CNT30176122Daucus carotaVigna angularis96.7629.0685.11329forward
CNT30113122Daucus carotaFicus carica90.8837.2382.2309forward
CNT30726405Daucus carotaLupinus angustifolius98.8262.5783.63336forward
CNT3050294Daucus carotaCucumis sativus98.5354.6584.48335forward

Expression of CNT30624959

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MVHLNRFDFSSQPRWAKSHNHTRLDGSSLDTSNRDSSNASNLVNILKRKTKRLIRGPLWLSDLIKSLKKS

Sequence

>CNT30624959
GTTGGCAGCCTCCTTGGCAGGATCATCTTTAGAGTTTGAGGCGACATAGCCACGCTTGAGATCTTTAACAGAAACATTCTTCACATTGAACCCAACATTG
TCACCTGGAAGGGCTTCCTGAAGAGCCTCATGGTGCATCTCAACAGATTTGACTTCAGTAGTCAACCCAGATGGGCCAAAAGTCACAACCATACCAGGCT
TGATGGTTCCAGTCTCGACACGTCCAACAGGGACAGTTCCAATGCCTCCAATCTTGTAAACATCCTGAAGCGGAAGACGAAGAGGCTTATCAGAGGGCCT
CTTTGGCTCAGTGATCTGATCAAGAGCCTCAAGAAGAGTT