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Detailed information on CNT30624957


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0G9Q8|NDHI_DAUCA, E-value = 1e-117

BLAST vs NONCODE:
NONTPRT002931, E-value = 2e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531354Daucus carotaEucalyptus grandis50.6930.2187.1806forward
CNT30317759Daucus carotaCorylus avellana48.3637.7188.3769forward
CNT30619402Daucus carotaSesamum indicum47.830.8788.95760forward
CNT30202349Daucus carotaPisum sativum23.425.7686.29372forward
CNT30569543Daucus carotaActinidia chinensis50.6916.8488.09806forward
CNT30589541Daucus carotaMusa acuminata29.1857.9384.7464forward
CNT30659065Daucus carotaTriticum dicoccoides11.5732.890.22184forward
CNT30606338Daucus carotaGossypium raimondii7.5523.8684.17120forward
CNT30215974Daucus carotaHelianthus annuus15.2833.288.48243forward
CNT30689544Daucus carotaTriticum urartu28.437.2486.73452forward
CNT30152193Daucus carotaPrunus persica30.7511.1991.21489forward
CNT30327547Daucus carotaAsparagus officinalis28.6814.4789.04456forward
CNT30150432Daucus carotaBrachypodium distachyon15.7943.5888.05251forward
CNT30551956Daucus carotaOryza brachyantha20.3812.8290.43324forward

Expression of CNT30624957

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MWIYLDIVIAPISFFIRKNFKNYILISNQIKNLPRFSLTKPINQ*

>peptide 2 (44 aa)
TCTIWFDFVVQIIPYHDVSGIVVISETKILVQTIDVTPSPTVQR*

Sequence

>CNT30624957
TACTTGTACAATCTGGTTTGATTTTGTAGTCCAAATAATCCCGTACCATGACGTATCTGGAATAGTAGTAATTAGTGAAACAAAAATACTTGTACAAACC
ATCGACGTAACTCCGTCCCCAACGGTCCAAAGATGAAAATCTTTGTAATATTCGGAACCATTCATGAACATTACAGCAAAAATGATTAAAACATTTATAG
CTCCTACGTAAATAAGAAGTTGCGCAGCAGCTACAAAATGGGAGTTTGATAGAATATAGAATAAGGATGTACAAACAAGAACCAATCCTAATGAAAAGGC
AGAATAAATTGGATTGGGGAGTAATACCACTCCCAGACCTCCTAATATAAGACCCGATCCCAGAAAGACTAAAAGAAAATCATGTATTGGTCCGGGTAAA
TCCATTATATATATAAATAGATAAATAAATCGAAATCTTTCATAACTTTAATTGACCTGGCCAGGAAAAAAGAAATCATTTTATCATACTTCTTCATTAT
TAATTCATTATTAATTGAATTTAATTTGAACAGATGTGGATTTATCTAGATATAGTTATTGCACCTATTTCGTTCTTTATCCGAAAGAATTTTAAAAACT
ATATATTAATTTCAAATCAAATCAAAAATTTACCACGATTCTCACTAACAAAACCAATCAATCAATAGTTTGGAGTTGTAGTTATTCACCAAGCAAGAGC
CTCATTCTTTTCTTTTACATCAAAATGGAGTCTTATTAATTGGGAGTTGCTCTCTTTTTTATTTCATAGGCAAATTCAAAATTGTTCGAGTCGTGTAATC
ATTAATTATTGACATTGGTAAACGCCCTAAAGCAATTTGATTATAATTCAATTCGTGGCGATCATATGTAGAAAGTTCATATTCTTCAGTCATTGATAAA
CAATTTGTTGGACAATACTCAACGCAATTACCACAAAATATACAGATTCCGAAATCAATACTGTAATTAAGCAATCGTTTCTTTCTAATATCCTTTTCCA
ATTTCCAATCTACAACAGGTAGATCTATAGGACATACACGAACACATACTTCACAAGCAATGCATTTATCAAATTCAAAGTGGATTCGGCCGCGGAAACG
CTCCGATGTAATCAATTTTTCGTAGGGATATTGAATAGTTACAGGTAAACGACTCGCATGTGATAAAGTAATCATGAAACCTTGGCCGATGTACCTTGCA
GCTCGTACTGTTTGTTGACTATAATTCATGAACTCAGTTACCATAGAAAACATATTGTGAATATCTATAAAAAATTTTATGCTTGTTTTGTTTCTTTCTC
TTGTTCTTGTTTGAGACAAGTCGTGAAGATAGAATATCATAGTCTTTTACAGTGAAAGAAGTTGGGAAGAAGTTGTTAATAATAGATTGCCGAGAGATAT
AGGTAAAAGAAATTTCCACCCAAGATTTAAGAGTTGGTCCATTCTTAGCCTTGGTAAAGTCCATCTTGTTGTGATAGCAATGAATAAGAACAAATAAGTT
TTAGCCAATGTAATAAAGATACCAATTATTGTTCCAAAGACTCTACCCGCTTTATTTATTTCAAAAAAAAAGAAAGGGACGTATGTGCGG