Detailed information on CNT30624770


BLAST search results

BLAST vs Swiss-Prot:
sp|P51819|HSP83_IPONI, E-value = 5e-73

BLAST vs NONCODE:
NONSTUT001022, E-value = 2e-31

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517898Daucus carotaJuglans regia52.5336.6984.04332forward
CNT30729348Daucus carotaCorchorus capsularis53.0137.0284.18335forward
CNT30381694Daucus carotaManihot esculenta54.2755.3282.22343forward
CNT30212755Daucus carotaHelianthus annuus37.8294.8484.1239forward
CNT30113681Daucus carotaFicus carica42.8837.2383.76271forward
CNT30724682Daucus carotaLupinus angustifolius24.5363.2783.23155forward

Expression of CNT30624770

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MLFIFLRVSNRSNGALLGTNRTALNSSCPSTEKCFTARCSSQSFVKLL*

>peptide 2 (89 aa)
MFLPIICQTFVESSIFILSNLLRLAQPDRLTLFFLFFLINFFHIAFLLLLVFIFIIADLFLNCLLHPEINWVANKLRVFLDEVLDPSLL*

>peptide 3 (44 aa)
ILFCCNISREILRGKSSESTTPLTKPRYSGINSSQLSMIKTLRT*

Sequence

>CNT30624770
ATTTTGTTCTGCTGTAACATTTCACGAGAGATATTGAGAGGCAAATCATCAGAGTCAACAACACCCTTGACAAAACCCAGGTACTCAGGAATCAACTCCT
CACAATTGTCCATGATAAAAACCCTGCGAACATAAAGCTTGATGTTGTTCATTTTCTTGCGCGTATCAAACAGATCAAACGGAGCCCTCTTGGGCACAAA
CAGAACGGCCTTGAACTCAAGCTGCCCCTCAACAGAGAAGTGCTTCACAGCAAGATGTTCCTCCCAATCATTTGTCAAACTTTTGTAGAAAGCAGCATAT
TCATCCTTAGTAATCTCCTCAGGCTTGCGCAACCAGATAGGCTCACTCTTTTCTTTCTCTTTTTCCTCATCAATTTCTTCCACATCGCCTTCCTTCTCCT
TCTTGTCTTCATCTTCATCATCGCTGATCTCTTTCTCAATTGTCTTCTCCACCCAGAGATAAATTGGGTAGCTAATAAACTCCGAGTGTTTCTTGATGAG
GTCCTTGATCCGTCTCTCCTCTAGATACTCCAACTGCACGTAAACAAAATCAGTGATAGTAGAAAACATAAAACAGTGACACATATTTGTAAATGACAAA
AACAATACAACCATATGATGTAAAGCTAATAT