Detailed information on CNT30624553


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-159

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30572860Daucus carotaVitis vinifera49.8573.6783.68680forward
CNT3032754Daucus carotaTheobroma cacao81.6784.9183.031114forward

Expression of CNT30624553

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSSVIVFPVRVFTNICMPPLNLNTR*

>peptide 2 (42 aa)
MSYHPPIAYQQKSTSAGLGEFPPCLEFSLSHCQLYQNFLLQG*

>peptide 3 (31 aa)
MVSELSTSKVIVLPVNVFTKICIPPRRRSTR*

>peptide 4 (52 aa)
MSLCWSGGIPSLSWILALTLSMVSELSTSRVIVLPVSVFTKICIPPRRRRTK*

>peptide 5 (48 aa)
MKGRLLLNIVVGQCAAILQLLSSKYKPLLVWWDAFLVLNLCFHIINGV*

>peptide 6 (79 aa)
MKSGFLLNVVISQCPTILQLLTSKNQPLLVWGNSLLVLNFRFHIVNCIRTFYFKGNRLPSESLNKDLHATAKAEHQMEG*

Sequence

>CNT30624553
CTCTATTTAAAAACGGCATGATAATTAAACCTGATTAAACAAACAACAATTAAACAGCTCAAGAGATTATTATATAATGTACTTCAGAGTACAAATCATA
AAGAACGCATCATATTATCGTTCCAAATGAAACTTAGTTCATAGAAAAGAAACATAAACCATCAATGTCAGGCGAAACCAAGCAAACATTCAGAAAACAT
TGGTAGAAACAACACTTTAGAAACCACCGCGGAGACGAAGAACAAGGTGCAGGGTAGACTCCTTCTGAATGTTGTAGTCCGCTAAGGTCCTTCCATCTTC
CAACTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATTCCCTCCTTATCTTGGATCTTAGCCTTCACGTTATCGATGGTGTCTGAGCTCTCC
ACCTCCAAGGTGATTGTCTTGCCAGTCAATGTCTTTACAAAGATTTGCATCCCTCCACGCAGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATAT
TGTAGTCGGCCAGTGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGAATCTTTGCTTT
CACATTATCAATGGTGTCTGAGCTCTCAACCTCAAGTGTGATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTGCATGCCACCTCTCAACCTCAATACC
AGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAA
TTCCCTCCTTGTCTTGAATTTTCGCTTTCACATTGTCAATTGTATCAGAACTTTCTACTTCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGAT
TTGCATGCCACCGCGAAGGCGGAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAGTCAGCAAGGGTCCGTCCATCCTCTAGCTGTTTACCAGCA
AAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACTTCTAGAGTGATAG
TCTTGCCAGTAAGTGTCTTTACAAAAATCTGCATTCCCCCACGTAGACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCTAAGGT
CCGTCCATCCTCTAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAATCTTCGCTTTGACATTGTCAATAGTG
TCCGAACTTTCAACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTTTTCACAAATATCTGCATCT