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Detailed information on CNT30624534


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-145

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701594Daucus carotaQuercus lobata49.9486.6582.79889forward
CNT30490421Daucus carotaOlea europaea37.1940.8983.69662forward
CNT30572920Daucus carotaVitis vinifera43.1579.1883.07768forward

Expression of CNT30624534

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSSVIVFPVRVFTNICMPPLNLNTR*

>peptide 2 (31 aa)
MVSELSTSKVIVLPVNVFTKICIPPRRRSTR*

>peptide 3 (31 aa)
MINNNSLMYTKREIDIDIERSKLHKSIKIYN*

>peptide 4 (52 aa)
MSLCWSGGIPSLSWILALTLSMVSELSTSRVIVLPVSVFTKICIPPRRRRTK*

>peptide 5 (48 aa)
MKGRLLLNIVVGQCAAILQLLSSKYKPLLVWWDAFLVLNLCFHIINGV*

Sequence

>CNT30624534
CTCTATTTAAAAACGGCATGATAATTAAACCTGATTAAACAAACAACAATTAAACAGCTCAAGAGATTATTATATAATGTACTTCAGAGTACAAATCATA
AAGAACGCATCATATTATCGTTCCAAATGAAACTTAGTTCATAGAAAAGAAACATAAACCATCAATGTCAGGCGAAACCAAGCAAACATTCAGAAAACAT
TGGTAGAAACAACACTTTAGAAACCACCGCGGAGACGAAGAACAAGGTGCAGGGTAGACTCCTTCTGAATGTTGTAGTCCGCTAAGGTCCTTCCATCTTC
CAACTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATTCCCTCCTTATCTTGGATCTTAGCCTTCACGTTATCGATGGTGTCTGAGCTCTCC
ACCTCCAAGGTGATTGTCTTGCCAGTCAATGTCTTTACAAAGATTTGCATCCCTCCACGCAGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATAT
TGTAGTCGGCCAGTGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGAATCTTTGCTTT
CACATTATCAATGGTGTCTGAGCTCTCAACCTCAAGTGTGATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTGCATGCCACCTCTCAACCTCAATACC
AGATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAATGTCCGTCCATCCTCTAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGA
TACCCTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACTTCTAGAGTGATAGTCTTGCCAGTAAGTGTCTTTACAAAAAT
CTGCATTCCCCCACGTAGACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGCTAAGGTCCGTCCATCCTCTAGCTGCTTACCAGCA
AAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAATCTTCGCTTTGACATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGTGATTG
TCTTGCCAGTAAGAGTTTTCACAAATATCTGCATCTGTATCAATGCAAACCCAAATTAACATTCAAGTCCAAGAACTATACTCACAGACTTAATAGCCCC
TCTACAATCCTTCTAACAAACATAATTAAAAGCAACAAAAAGATCAATACATACATCCCCAGTGTTCTAAACTTAACTATGTTGTTTACAGATTAAAAAG
ACACCCTAATTTCAATAATCCTAGAAATCGACATGATCAACAAAAATAGTGTAAAGTTCAGCTCAACATAAATCTATAACTACCAGATACAATCTAATTC
AAATTAAACAGATGACAAAAATCTAATTTACCATAAATCAACAATAGTTACCCGATAAATAAACCAAAAAATACGATCAAATCAGGAAAAACATAGAGGT
TAAAACAACAGGATGATCAACAATAATAGTCTTATGTACACAAAACGAGAGATCGACATCGATATAGAAAGATCTAAATTACACAAGTCGATCAAAATCT
ATAACTAACAAAGGCAAAAACAATATAATCAAAGTACGACGAGTATAAACAATCACAATCAATATCCACGAGGCAAGATTAGATGTTTAGCGATTCAGAT
CTCGTACCTTGAGTAGTTGTTGATCGATTAGAATTTTGTATGTATAGGCTAGGGTTTGCGATGAGAAAATATAATGAGAT