Detailed information on CNT30624513


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532296Daucus carotaEucalyptus grandis86.1392.5282.571360forward
CNT30701438Daucus carotaQuercus lobata81.3288.0181.311284forward
CNT3086449Daucus carotaVigna radiata86.8987.3380.541372forward

Expression of CNT30624513

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MKSGFLLNVVISQCPTILQLLTSKNQPLLVWGNSLLVLNFRFHIVNCIRTFYFKGNRLPSESLNKDLHATAKAEHQMEG*

>peptide 2 (52 aa)
MSLCWSGGIPSLSWILALTLSIVSELSTSRVIVFPVRVFTKICIPPRRRRTK*

>peptide 3 (48 aa)
MKGRLLLNIVVGQCAAILQLLSSKYKPLLVWWDAFLVLNLCFHIINGV*

>peptide 4 (42 aa)
MSYHPPIAYQQKSTSAGLGEFPPCLEFSLSHCQLYQNFLLQG*

>peptide 5 (52 aa)
MSLCWSGGIPSLSWILALTLSMVSELSTSRVIVLPVSVFTKICIPPRRRRTK*

>peptide 6 (31 aa)
MVSELSTSKVIVLPVNVFTKICIPPRRRSTR*

>peptide 7 (31 aa)
MVSELSTSSVIVFPVRVFTNICMPPLNLNTR*

Sequence

>CNT30624513
GCATGATAATTAAACCTGATTAAACAAACAACAATTAAACAGCTCAAGAGATTATTATATAATGTACTTCAGAGTACAAATCATAAAGAACGCATCATAT
TATCGTTCCAAATGAAACTTAGTTCATAGAAAAGAAACATAAACCATCAATGTCAGGCGAAACCAAGCAAACATTCAGAAAACATTGGTAGAAACAACAC
TTTAGAAACCACCGCGGAGACGAAGAACAAGGTGCAGGGTAGACTCCTTCTGAATGTTGTAGTCCGCTAAGGTCCTTCCATCTTCCAACTGCTTTCCAGC
AAAAATCAACCTCTGCTGATCTGGTGGAATTCCCTCCTTATCTTGGATCTTAGCCTTCACGTTATCGATGGTGTCTGAGCTCTCCACCTCCAAGGTGATT
GTCTTGCCAGTCAATGTCTTTACAAAGATTTGCATCCCTCCACGCAGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCCAGTG
TGCGGCCATCCTCCAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATGGT
GTCTGAGCTCTCAACCTCAAGTGTGATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTGCATGCCACCTCTCAACCTCAATACCAGATGAAGAGTGGAT
TCCTTTTGAATGTTGTAATCAGCCAATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTT
GAATTTTCGCTTTCACATTGTCAATTGTATCAGAACTTTCTACTTCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCATGCCACCGCG
AAGGCGGAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAGTCAGCAAGGGTACGCCCATCTTCGAGCTGCTTGCCAGCAAAAATGAGCCTCTGC
TGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATAGTATCAGAACTTTCAACTTCTAGAGTGATAGTCTTTCCGGTAAGGG
TCTTTACGAAAATCTGCATTCCCCCACGTAGACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCGTCCATCCTCTAG
CTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCGACT
TCTAGAGTGATAGTCTTGCCAGTAAGTGTCTTTACAAAAATCTGCATTCCCCCACGTAGACGCAGAACCAAATGAAGGGTCGACTCCTTCTGAATGTTGT
AATCAGCTAAGGTCCGTCCATCCTCTAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGAATCTTCGCTTTGAC
ATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTTTTCACAAATATCTGCATCTGT