Detailed information on CNT30624206


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-160

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020365Daucus carotaCitrullus lanatus80.7251.3281.81896forward

Expression of CNT30624206

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSSVIVFPVRVFTNICMPPLNLNTR*

>peptide 2 (31 aa)
MVSELSTSKVIVLPVNVFTKICIPPRRRSTR*

>peptide 3 (48 aa)
MKGRLLLNIVVGQCAAILQLLSSKYKPLLVWWDAFLVLNLCFHIINGV*

>peptide 4 (79 aa)
MKSGFLLNVVISQCPTILQLLTSKNQPLLVWGNSLLVLNFRFHIVNCIRTFYFKGNRLPSESLNKDLHATAKAEHQMEG*

>peptide 5 (37 aa)
LIKQTTIKQLKRLLYNVLQSTNHKERIILSFQMKLSS*

>peptide 6 (42 aa)
MSYHPPIAYQQKSTSAGLGEFPPCLEFSLSHCQLYQNFLLQG*

Sequence

>CNT30624206
ACCTGATTAAACAAACAACAATTAAACAGCTCAAGAGATTATTATATAATGTACTTCAGAGTACAAATCATAAAGAACGCATCATATTATCGTTCCAAAT
GAAACTTAGTTCATAGAAAAGAAACATAAACCATCAATGTCAGGCGAAACCAAGCAAACATTCAGAAAACATTGGTAGAAACAACACTTTAGAAACCACC
GCGGAGACGAAGAACAAGGTGCAGGGTAGACTCCTTCTGAATGTTGTAGTCCGCTAAGGTCCTTCCATCTTCCAACTGCTTTCCAGCAAAAATCAACCTC
TGCTGATCTGGTGGAATTCCCTCCTTATCTTGGATCTTAGCCTTCACGTTATCGATGGTGTCTGAGCTCTCCACCTCCAAGGTGATTGTCTTGCCAGTCA
ATGTCTTTACAAAGATTTGCATCCCTCCACGCAGACGAAGCACCAGATGAAGGGTAGACTCCTTTTGAATATTGTAGTCGGCCAGTGTGCGGCCATCCTC
CAGCTGCTTTCCAGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATGGTGTCTGAGCTCTCA
ACCTCAAGTGTGATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTGCATGCCACCTCTCAACCTCAATACCAGATGAAGAGTGGATTCCTTTTGAATGT
TGTAATCAGCCAATGTCCTACCATCCTCCAATTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGAATTTTCGCTTT
CACATTGTCAATTGTATCAGAACTTTCTACTTCAAGGGTAATCGTCTTCCCAGTGAGAGTCTTAACAAAGATTTGCATGCCACCGCGAAGGCGGAGCACC
AAATGGAGGGTTGATTCCTTCTGGATGTTATAGTCAGCAAGGGTCCGTCCATCCTCTAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGA
TACCTTCCTTGTCTTGAATCTTCGCTTTGACATTGTCAATAGTGTCCGAACTTTCAACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTTTTCACAAATAT
CTGCATCTGT