Detailed information on CNT30624049


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH32|UBQ4_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201346Daucus carotaPisum sativum32.5765.0284.5671forward
CNT30169886Daucus carotaPistacia vera55.2966.0782.441139forward
CNT30568725Daucus carotaActinidia chinensis55.2498.182.511138forward
CNT30608559Daucus carotaGossypium raimondii55.4474.8481.71142forward
CNT30477817Daucus carotaArabidopsis halleri48.8894.1182.821007forward

Expression of CNT30624049

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVIVFPVKVLTKICIPPRRRSTR*

>peptide 2 (54 aa)
MIRTNHLKEIETYEQTDEQIQILTNIYSFYLINREIAYITQRRETERERYLPCN*

>peptide 3 (85 aa)
MPSLSWILALTLSIVSELSTSKVMVFPVRVFTKICICTSHKHKIKTIFINSTTNEFPDPHPYLHNTRNKTYTMNQLNITFYQFSN*

>peptide 4 (72 aa)
MECGLLLDVVVSQSPAIFELLTSENKTLLIRRNAFLVLDLGFDVVDCVRTFHLQGDGLSGQSFHKDLHLHIT*

>peptide 5 (48 aa)
MECRLLLDVVVGKGPAVLQLLTSEDQPLLVWGNSFLVLDLGLDIVNGI*

>peptide 6 (31 aa)
MVSELSTSRVIVLPVRVFTKICIPPRRRNTR*

Sequence

>CNT30624049
GCAAATACCTGAAAAATCATTAAGCACTATTTTCGTTATTCGAACTTAGATCTAAACCGGTTGTTGCAATCTAGACATAACATAGACATATATCAGGGAT
CTTCAACACGCATATATAAATGTTATATAAAACATAACAATTACTTGAAAACCAACAAGCAAATTACTAAAAAACAAGTTTATTCACCAACACTTGAATA
ACCACAGTAACTGTTCTTCCCACACAAGGAGCTTAAACAAAGTTCATAAAAAAAGGACAAATTCATCAGACACCAACTAGGAACACTGCTCAGAAATTGC
CACCACGGAGACGCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGAGTCCTACCATCCTCAAGTTGCTTTCCAGCAAAGATCAA
CCTCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTATCTGAACTCTCCACCTCTAGGGTTATAGTCTTGCCG
GTCAGAGTCTTCACGAAAATCTGCATACCACCACGGAGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAGGGTCCTGCCAT
CCTCCAACTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGGATGCCTTCCTTATCCTGAATTTTTGCTTTGACGTTGTCAATAGTGTCAGAGCT
CTCAACTTCAAGGGTGATTGTCTTCCCAGTCAGGGTCTTGACAAAGATCTGCATTCCACCACGAAGACGCAACACAAGATGGAGTGTAGACTCCTTCTGG
ATGTTGTAGTCGGCAAGGGTCCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAACCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGG
CCTTGACATTGTCAATGGTATCTGAACTCTCAACTTCAAGGGTAATAGTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCATCCCTCCACGAAGACGGAG
CACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCGTCCTCGAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCCGGG
GGAATGCCCTCCTTATCCTGAATCTTGGCCTTGACATTGTCAATTGTGTCTGAGCTCTCGACTTCCAGAGTGATCGTCTTTCCGGTCAACGTCTTAACGA
AGATCTGCATACCCCCGCGGAGACGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTGCCATCTTCGAGCTGCTTACC
AGCGAAAATAAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATTGTGTCAGAACTTTCCACCTCCAAGGTG
ATGGTCTTTCCGGTCAGAGTTTTCACAAAGATCTGCATCTGCACATCACATAAACACAAAATTAAAACAATTTTTATCAATTCAACAACTAACGAATTTC
CAGATCCGCATCCGTATTTACATAACACACGCAATAAAACCTATACGATGAATCAATTGAACATCACGTTTTATCAATTCAGCAACTAACAAAATTCCAG
ATCATCCGCATATACATAATACACACAATAAAAAAGAATCAATTAAACATCTAACAAAATTACAGATCAGGATCTATATATTTTCCATAAGTATGTAACG
AAATTATCATGTAGATCTGTGTATATATTGTTACAAAATTAGAGGAACGAATTGATGCGTTCAGATCTTGACATAAACTTACAGATAGATACACAATCAG
ATGAACAAAGACGATGTATTCAGATCTGTATGTACATGTAAAGATTAATACATAATGATACGAACAAATCACCTAAAAGAGATCGAAACATACGAACAAA
CAGACGAACAAATACAGATCTTAACCAACATCTATAGCTTCTATCTAATCAATAGAGAAATAGCATATATAACGCAGAGGCGAGAGACAGAGAGAGAGAG
ATATTTACCTTGCAATTGAAGAGAAAAGAGATTTGTTGTGTTGGGTTGAGAGGAGAGAAT