Detailed information on CNT30623964


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH32|UBQ4_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30312399Daucus carotaCamelina sativa55.2987.2184.021139forward
CNT30120507Daucus carotaCitrus clementina42.9681.3483.28885forward
CNT3066527Daucus carotaSelaginella moellendorffii40.3999.6483.17832forward

Expression of CNT30623964

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MECGLLLDVVVSQSPAIFELLTSENKTLLIRRNAFLVLDLGFDVVDCVRTFHLQGDGLSGQSFHKDLHLHIT*

>peptide 2 (54 aa)
MIRTNHLKEIETYEQTDEQIQILTNIYSFYLINREIAYITQRRETERERYLPCN*

>peptide 3 (31 aa)
MVSELSTSRVIVLPVRVFTKICIPPRRRNTR*

>peptide 4 (85 aa)
MPSLSWILALTLSIVSELSTSKVMVFPVRVFTKICICTSHKHKIKTIFINSTTNEFPDPHPYLHNTRNKTYTMNQLNITFYQFSN*

Sequence

>CNT30623964
GCAAATACCTGAAAAATCATTAAGCACTATTTTCGTTATTCGAACTTAGATCTAAACCGGTTGTTGCAATCTAGACATAACATAGACATATATCAGGGAT
CTTCAACACGCATATATAAATGTTATATAAAACATAACAATTACTTGAAAACCAACAAGCAAATTACTAAAAAACAAGTTTATTCACCAACACTTGAATA
ACCACAGTAACTGTTCTTCCCACACAAGGAGCTTAAACAAAGTTCATAAAAAAAGGACAAATTCATCAGACACCAACTAGGAACACTGCTCAGAAATTGC
CACCACGGAGACGCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGAGTCCTACCATCCTCAAGTTGCTTTCCAGCAAAGATCAA
CCTCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTATCTGAACTCTCCACCTCTAGGGTTATAGTCTTGCCG
GTCAGAGTCTTCACGAAAATCTGCATACCACCACGGAGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAGGGTCCTGCCAT
CCTCCAACTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGGATGCCTTCCTTATCCTGAATTTTTGCTTTGACGTTGTCAATAGTGTCAGAGCT
CTCAACTTCAAGGGTGATTGTCTTCCCAGTCAGGGTCTTGACAAAAATCTGCATACCACCACGGAGTCGGAGAACCAGATGGAGTGTTGACTCTTTCTGA
ATGTTGTAGTCTGCAAGAGTCCTGCCATCCTCCAGTTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTAG
CTTTCACATTGTCAATCGTATCCGAGCTCTCAACCTCCAGGGTAATAGTCTTGCCTGTCAAGGTCTTGACGAAAATCTGCATCCCTCCACGAAGACGGAG
CACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCGTCCTCGAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCCGGG
GGAATGCCCTCCTTATCCTGAATCTTGGCCTTGACATTGTCAATTGTGTCTGAGCTCTCGACTTCCAGAGTGATCGTCTTTCCGGTCAACGTCTTAACGA
AGATCTGCATACCCCCGCGGAGACGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTGCCATCTTCGAGCTGCTTACC
AGCGAAAATAAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATTGTGTCAGAACTTTCCACCTCCAAGGTG
ATGGTCTTTCCGGTCAGAGTTTTCACAAAGATCTGCATCTGCACATCACATAAACACAAAATTAAAACAATTTTTATCAATTCAACAACTAACGAATTTC
CAGATCCGCATCCGTATTTACATAACACACGCAATAAAACCTATACGATGAATCAATTGAACATCACGTTTTATCAATTCAGCAACTAACAAAATTCCAG
ATCATCCGCATATACATAATACACACAATAAAAAAGAATCAATTAAACATCTAACAAAATTACAGATCAGGATCTATATATTTTCCATAAGTATGTAACG
AAATTATCATGTAGATCTGTGTATATATTGTTACAAAATTAGAGGAACGAATTGATGCGTTCAGATCTTGACATAAACTTACAGATAGATACACAATCAG
ATGAACAAAGACGATGTATTCAGATCTGTATGTACATGTAAAGATTAATACATAATGATACGAACAAATCACCTAAAAGAGATCGAAACATACGAACAAA
CAGACGAACAAATACAGATCTTAACCAACATCTATAGCTTCTATCTAATCAATAGAGAAATAGCATATATAACGCAGAGGCGAGAGACAGAGAGAGAGAG
ATATTTACCTTGCAATTGAAGAGAAAAGAGATTTGTTGTGTTGGGTTGAGAGGAGAGAAT