Detailed information on CNT30623891


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595410Daucus carotaEragrostis curvula48.681.5281.921112forward

Expression of CNT30623891

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVIVLPVRVFTKICIPPRRRNTR*

>peptide 2 (72 aa)
MECGLLLDVVVSQSPAIFELLTSENKTLLIRRNAFLVLDLGFDVVDCVRTFHLQGDGLSGQSFHKDLHLHIT*

>peptide 3 (85 aa)
MPSLSWILALTLSIVSELSTSKVMVFPVRVFTKICICTSHKHKIKTIFINSTTNEFPDPHPYLHNTRNKTYTMNQLNITFYQFSN*

>peptide 4 (52 aa)
MSLCWSGGIPSLSWILAFTLSIVSELSTSRVIVFPVKVLTKICIPPRRRSTR*

>peptide 5 (54 aa)
MIRTNHLKEIETYEQTDEQIQILTNIYSFYLINREIAYITQRRETERERYLPCN*

>peptide 6 (37 aa)
MVSELSTSRVIVFPVKVLTKICIPPRRRRTRWSVDSF*

>peptide 7 (48 aa)
MECRLLLDVVVGKGPAVLQLLTSEDQPLLVWGNSFLVLDLGLDIVNGI*

Sequence

>CNT30623891
GCAAATACCTGAAAAATCATTAAGCACTATTTTCGTTATTCGAACTTAGATCTAAACCGGTTGTTGCAATCTAGACATAACATAGACATATATCAGGGAT
CTTCAACACGCATATATAAATGTTATATAAAACATAACAATTACTTGAAAACCAACAAGCAAATTACTAAAAAACAAGTTTATTCACCAACACTTGAATA
ACCACAGTAACTGTTCTTCCCACACAAGGAGCTTAAACAAAGTTCATAAAAAAAGGACAAATTCATCAGACACCAACTAGGAACACTGCTCAGAAATTGC
CACCACGGAGACGCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGAGTCCTACCATCCTCAAGTTGCTTTCCAGCAAAGATCAA
CCTCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTATCTGAACTCTCCACCTCTAGGGTTATAGTCTTGCCG
GTCAGAGTCTTCACGAAAATCTGCATACCACCACGGAGACGCAACACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCTGCAAGGGTCCTGCCAT
CCTCCAACTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGGATGCCTTCCTTATCCTGAATTTTTGCTTTGACGTTGTCAATAGTGTCAGAGCT
CTCAACTTCAAGGGTGATTGTCTTCCCAGTCAGGGTCTTGACAAAGATCTGCATTCCACCACGAAGACGCAACACAAGATGGAGTGTAGACTCCTTCTGG
ATGTTGTAGTCGGCAAGGGTCCTGCCGTCCTCCAACTGCTTACCAGCGAAGATCAACCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGG
CCTTGACATTGTCAATGGTATCTGAACTCTCAACTTCAAGGGTAATAGTCTTTCCTGTCAAGGTCTTGACAAAAATCTGCATCCCTCCACGGAGACGGAG
GACCAGATGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGCTAGGGTTCTTCCGTCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGT
GGGATCCCTTCCTTATCCTGGATCTTAGCTTTCACATTGTCAATAGTATCCGAGCTCTCAACCTCAAGGGTAATAGTCTTTCCTGTCAAGGTCTTGACGA
AAATCTGCATCCCTCCACGAAGACGGAGCACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCGTCCTCGAGCTGCTTTCC
AGCAAAGATCAATCTCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGAATCTTGGCCTTGACATTGTCAATTGTGTCTGAGCTCTCGACTTCCAGAGTG
ATCGTCTTTCCGGTCAACGTCTTAACGAAGATCTGCATACCCCCGCGGAGACGGAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCA
GAGTCCTGCCATCTTCGAGCTGCTTACCAGCGAAAATAAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGAT
TGTGTCAGAACTTTCCACCTCCAAGGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAGATCTGCATCTGCACATCACATAAACACAAAATTAAAACAATT
TTTATCAATTCAACAACTAACGAATTTCCAGATCCGCATCCGTATTTACATAACACACGCAATAAAACCTATACGATGAATCAATTGAACATCACGTTTT
ATCAATTCAGCAACTAACAAAATTCCAGATCATCCGCATATACATAATACACACAATAAAAAAGAATCAATTAAACATCTAACAAAATTACAGATCAGGA
TCTATATATTTTCCATAAGTATGTAACGAAATTATCATGTAGATCTGTGTATATATTGTTACAAAATTAGAGGAACGAATTGATGCGTTCAGATCTTGAC
ATAAACTTACAGATAGATACACAATCAGATGAACAAAGACGATGTATTCAGATCTGTATGTACATGTAAAGATTAATACATAATGATACGAACAAATCAC
CTAAAAGAGATCGAAACATACGAACAAACAGACGAACAAATACAGATCTTAACCAACATCTATAGCTTCTATCTAATCAATAGAGAAATAGCATATATAA
CGCAGAGGCGAGAGACAGAGAGAGAGAGATATTTACCTTGCAATTGAAGAGAAAAGAGATTTGTTGTGTTGGGTTGAGAGGAGAGAAT