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Detailed information on CNT30623801


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 1e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548039Daucus carotaIpomoea triloba12.6220.8885.5690forward
CNT3046524Daucus carotaPrunus dulcis12.926.5983.792forward

Expression of CNT30623801

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MWMLMPLKPCCRDFFAMLGEERFLGCEISE

>peptide 2 (32 aa)
MTVPIKPPRTLAHTPNLSASLGQLAGGVMGWW*

Sequence

>CNT30623801
TTACTACACCAAAACATAAAAGAAGGCTAGGTACCTTTCTTTAACAAGAATTATTATTACAATTTTAAGCACAAAGTGAAATATAAGCGAATCAGATAGA
AAAGAGGACTATAGCAACACAAAAGTAAAACTCAAGGAAATTTTTCGAGAAAAAAAAAAACTTTGGTTTAATTACACGCATTTGAAGCCCTTGGGGACCT
TCTTGCCACAGTAGTTAATCAACAAGCTCAAATCAACCGGAACATTGAGGTTAATACCCAAGATATTGGCTTTAATCGCGGTGCAGAGACAAATAGCAGC
TTCAAGATCGACAAGGCCTTCGAGGAGACTACAGCATGGCAGCTTAGGTGGAGTTCCAATGACCGTCCCGATCAAGCCACCTAGAACCTTGGCACACACT
CCCAACTTGAGTGCATCTCTAGGGCAGCTTGCTGGTGGAGTGATGGGGTGGTGGTGAGGTGGTGGCGGTGGGCAAAGTGGCTTCGGGGGTGTTGGTGTAG
GTGTTGGAGTTGGTGGTGGTGGTGGAGGGCAGCTAGGTTTCGGCATTGGTGGTGGTGGGCATGGAGTGTGATGAGTTGAAGTTACTAAAGTGAGGAAGAG
AAGGTTAAGGACTAGGAAGAAAGATGTGGATGCTAATGCCTTTGAAGCCATGCTGCAGAGACTTCTTTGCTATGTTAGGAGAGGAGAGATTCTTGGGTTG
TGAGATTAGTGAA