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Detailed information on CNT30623625


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 8e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526713Daucus carotaPhaseolus vulgaris12.2126.1684.9373forward
CNT30159319Daucus carotaPistacia vera12.3729.1387.8474forward
CNT3091021Daucus carotaSolanum tuberosum13.8820.3486.7583forward
CNT30560987Daucus carotaActinidia chinensis24.4128.7485.62146forward

Expression of CNT30623625

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLDERNEGSAHQQSIGNMRCFLAEIDMASELLIYVVSQR

Sequence

>CNT30623625
TCCTCATTGAAAATGATTCCTTGAGACACTGGAAGAAAGTTTTTGCCTAAATGCCTATGGTCCTACCTTTTCTAACTTATCTCCTACTAGCTTACAAAAA
ATTTCTAAACTACTTATTTTGATCAGGTTCTTCTCTATGATTTTCTTCTCAAGCTTGAGGCGAGATCTGTAAACACATCTTCTCTGCAGGGAATTGTAAG
ACCCCCCTCTGGATGATCAAAACCAAATTCTTCCTCAGCTTGACATAGCAAGTCCTGGAAGGCAGGCTCAGCCAAGTACGAAATTGGAACAACAAATCTT
TTTCTTTGGCTCTCCCCAACATAAACTGCCAAGCAGCCCTTTGGGACGTCTGAAACTGCTGTAGTTGCAAAAGAAGACCCCTGCAAAATTTTCTTGACAT
GAGGAATACGAGGCATGCGGATACCCATGTTTCTAAGTTGGTATTCTTAAAATGGATGTCGAGAGGGAAAGGATGAGACGATGCTTGATGAAAGAAATGA
AGGTAGTGCACATCAGCAATCAATTGGGAACATGAGATGTTTCCTAGCAGAAATAGATATGGCCTCTGAGTTGTTAATCTATGTGGTGAGCCAAAGAG