Detailed information on CNT30623458


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FJG0|SAU20_ARATH, E-value = 4e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315163Daucus carotaCorylus avellana24.1412.7384.4277forward
CNT30727278Daucus carotaCorchorus capsularis44.213.5881.56141forward
CNT30487885Daucus carotaOlea europaea21.634.9288.4169forward

Expression of CNT30623458

Peptides detected in this lncRNA

>peptide 1 (31 aa)
SVQKINEGVFFAWYCEATFWMTKPKFFLSLT*

Sequence

>CNT30623458
ATCTGTTCAAAAGATTAATGAAGGTGTCTTCTTTGCATGGTATTGTGAGGCCACCTTCTGGATGACTAAACCCAAATTCTTCCTCAGCTTGACTTAACAG
GTCTTGAAACGTAGGCTCATTCAAGTAAGAGATCGGAACTACAAATCTTCTTCTTTGGTTCTCCCCAACATACACTGCAATACATCCCTTGGGGACATTT
GTACTGCGATCAAGATTTCTTAAGGAAAATTGTCTGTTGAGAATTTGCTTGAGATTAGTGACATGAGGCACACGAATACCCATGATGCTCAAGAAAAATT
GAAACTTCAACAAATATGG