Detailed information on CNT30623440


BLAST search results

BLAST vs Swiss-Prot:
sp|P62981|RS27A_SOLTU, E-value = 9e-71

BLAST vs NONCODE:
NONPOPT001132, E-value = 1e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Daucus carotaCorylus avellana11.3171.4389.33225forward
CNT30518728Daucus carotaJuglans regia11.4138.891.19227forward
CNT30728895Daucus carotaCorchorus capsularis11.1130.4890.05221forward
CNT30628786Daucus carotaVigna unguiculata11.4146.3390.31227forward
CNT30220676Daucus carotaHordeum vulgare11.7641.5690.6234forward
CNT30649899Daucus carotaRosa chinensis11.1131.6291.4221forward
CNT30720110Daucus carotaTriticum spelta11.7637.0391.03234forward
CNT30571087Daucus carotaVitis vinifera10.832.4389.77215forward
CNT30326410Daucus carotaAsparagus officinalis12.0620.0291.25240forward

Expression of CNT30623440

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLILSHSQFLLKSHHSNFALFQIFSKLSSYLY*

>peptide 2 (64 aa)
PLPFEMECSFSPILNFFSNLIIAILHSFKFFQNFLPIFISFKYFLLIPFHSVPFSPTKHNIRVG*

>peptide 3 (53 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKICILGAAVEDEN*

>peptide 4 (83 aa)
MPIKMIRHESPGPTLRIRTLLPQPLHLPTLIHLVELQHGELDLLMLVLDLLGLGVGLLLPLLAAAAETEDEVESGLLLDVVVG*

Sequence

>CNT30623440
CCCCTTCCATTTGAGATGGAATGCTCATTCTCTCCCATTCTCAATTTCTTCTCAAATCTCATCATAGCAATTTTGCACTCTTTCAAATTTTTTCAAAACT
TTCTTCCTATCTTTATTAGTTTCAAGTATTTTTTACTCATTCCATTCCATTCCGTTCCATTCTCCCCAACCAAACACAACATAAGAGTAGGCTAAATAAA
AATTACAAGCTGGCTAATGAGTTCTCATAAGTCATAAAAGAATATACAAGTCACAAGCACGATTGTCACCTTGGTATGGTGACAATCATGATTTCGACTT
GGTATAGTGACAGCGAAATATACAATTGTGTGATACTGTGATTTGATCTAATTTGTAATTAAGTATGGTGCTGGTAGTGCAGTGCAACAACACAATTAAA
CAGAAATGATATATACAGAATTAAGCAGAATTATTTATGCACAATACAGATTCCAGATAAACAAAGCAGAGGCAATAATCAGCAGAAAATAGAGCAGAAA
TCTGCAGAAGTGCAAAACAAAAAATCACAGAAATTACAACTGCAGAGTGCAAAAATTAAAACAGCAGAATGCAATAAACACATAACCAGAAACAGTTAAC
ATATCAGTTAACATATTCTGCAGGCAAGTTAAAAAAATAAGTCAGAGCTACCTAAAAAAAGAGTCAGAATGCTCAATCTGCAGCTCGACTAGTCAACCAG
GCGACTGAAATATCGACATTCAGATAGTCGACATCCCTTCATCACTTAATCGACTCGTCGCCGACTAGTCGACCAACATGACAACCACGGTCACAAGAAA
CTGACAAGTTAACAAGCTCAAACCAAATAATTCACGCTTGTCAAATATCAAATTCATTCTTAGCCGATCAAAATTATAAGAACATAACAGTTTCAACATG
ATATCAAGTTCTAGAGCAACATAAACACTCAGAATTATGCCTAAAACAGCAGAGTCCACAACACCTAGTTACCTATGTTTACATCCTAAGAAGCAGCATG
AACTAGGCAAGGAAATTAAATAAAATCACACATGACCTACATCTCATATTTTTGTTTCTACCAACAAGACACAAATCAGACTCTAAACTGAAATATTACA
GGGAACAAGTAAAAAAGCAGGCATGAACAACTACTCTTGAAGAAATGACCAAAGCACTCAAATCCAACATTTGAATCCCATCAGCTAAGCAAATACTAAA
TCAACACAACAAATCATTCCACCGCATAAAAAACCATTATGCCAAAAGTAAATTAACGACCTAAACACAGATATAACATCACGACATAACAGAAAAAACA
ATAAGCATAAATACTAAATATCAATAATCCAAATCCAAATTCAACAATTCATATCGAAATTAAACATCCATTTCGAAACAAAAACAAAACACCGCAACAT
CAAAACACGATATAAGAAAAACCTAATCAGTCGCCTCCAGCCTTCTGGTAAACATAGGTGAGCCCACACTTGCCACAATAATGCCTATCAAAATGATTCG
CCATGAAAGTCCCGGCCCCACACTCCGCATTCGGACACTCCTTCCTCAGCCTCTGCACCTTCCCACTCTCATCCACCTTGTAGAACTGCAGCACGGCGAG
CTTGACCTTCTTATGCTTGTGCTTGATCTTCTTGGGCTTGGTGTAGGTCTTCTTCTTCCTCTTCTTGCCGCCGCCGCGGAGACGGAGGACGAGGTGGAGA
GTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCTT
TGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATTTT
GGGTGCGGCTGTAGAAGATGAGAATTAGGGGTCATGCGAGGTTTTATATCGTGAGGATTAGGGTTGGGCTTTTTGTTGGGCTTTGGACGG