Detailed information on CNT30623435


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200216Daucus carotaPisum sativum20.7919.5387.9358reverse complement
CNT3046251Daucus carotaPrunus dulcis20.7919.2789.6658reverse complement
CNT30541676Daucus carotaBrassica napus21.5119.6791.6760reverse complement
CNT3059713Daucus carotaArabidopsis lyrata20.0718.2489.2956reverse complement
CNT3081558Daucus carotaBrassica juncea21.157.3789.8359forward
CNT30612441Daucus carotaArabis alpina20.0718.1892.8656forward
CNT30409088Daucus carotaPapaver somniferum27.623.5585.7177forward
CNT3053266Daucus carotaAmborella trichopoda20.4318.5189.4757reverse complement

Expression of CNT30623435

Peptides detected in this lncRNA

>peptide 1 (30 aa)
KMVVDLSGSSGVKWTCQEQACYPSTDKRGK*

Sequence

>CNT30623435
AAAGATGGTTGTTGATTTGAGTGGCTCATCGGGTGTTAAATGGACTTGCCAAGAACAAGCCTGTTATCCTTCCACCGACAAGAGAGGGAAGTGATCGCTG
CTCTGTGAAACCAGCCTCGCGCTGTGCCTTCCGCTTTAGTGGCCAAGGCACAACTCCATACTTGGAATGGGCAAGCCTGTGCAAACTTCAACAGAGCCCA
GCCTTCTGAACCAAGCCAAACTCCAGCCATCTTAAAGCTCTCACTCGAGTTACAAGCCCACGCTACCAGGCTCAGCTGG