CANTATAdb - search

Detailed information on CNT30623426

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30316435	Daucus carota	Corylus avellana	40.4	95.04	85.71	728	forward
CNT30264722	Daucus carota	Brassica rapa	50.55	86.11	84.41	911	forward
CNT30410857	Daucus carota	Papaver somniferum	50.89	70.21	84.51	917	forward
CNT30704854	Daucus carota	Prunus avium	61.93	62.59	86.56	1116	forward
CNT30111644	Daucus carota	Ficus carica	62.21	78.67	84.12	1121	forward
CNT30726149	Daucus carota	Lupinus angustifolius	50.55	47.85	83.53	911	forward

Expression of CNT30623426

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVIVFPVRVLTKICIPPRRRSTR*

>peptide 2 (40 aa)
MVSELSTSRVIVFPVKVLTKICIPPRSLRTKWRVDSFWML*

>peptide 3 (30 aa)
MVFPVKVLTKICIPPRRRRTKWRVDSFWIL*

>peptide 4 (56 aa)
MPSLSWILALTLSIVSELSTSRVMVFPVRVFTKICICTSTQSQQFRLHSNQTTNYV*

Sequence

>CNT30623426
ATTAAACCAGAAACTATCACACGACCACAGCAAAATACTTATTAAACTGATCTTTTATTAAGACTTAAAGCCACCACAACACATTGTTCTTTCCCCCACA
GGGGAAAACACTAAAACAAACTTTGATTTAAAACAAACAAGTTCAACAGAAACACAAACTTCTTTTCAGAAACCACAGCCACGGGCGCTTCCAACAGGCT
TAGAGATCACCACCACGAAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTCCTTCCATCCTCAAGCTGCTTACCAG
CAAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATCCTGAATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCCAAGGTGAT
AGTCTTTCCAGTCAGAGTCTTAACAAAGATCTGCATACCACCACGCAGACGAAGCACAAGATGAAGGGTTGATTCCTTCTGGATATTGTAATCAGCTAGG
GTCCTGCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCAATGG
TGTCAGAGCTCTCAACCTCAAGAGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATACCACCACGGAGCCTGAGGACCAAGTGGAGAGTGGA
CTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCC
TGGATCTTGGCCTTGACATTGTCGATCGTATCAGAGCTCTCGACCTCAAGGGTGATTGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATACCACCAC
GGAGCCTGAGGACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTG
CTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTTCCCTGTCAAA
GTCTTGACGAAGATCTGCATACCACCACGAAGACGGAGGACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCAAGGGTCCTGCCGTCTTCAA
GTTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCGAC
CTCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATTTGCATCTGTACATCAACACAATCACAACAATTTAGACTACATTCAAATCAAACAACT
AATTATGTCTGACAACACATATCTACGTCTATTTAAACAATGAAACAATCAAAGCAGCCCTAATTTTATTAAGAAAAATATACATATACACAGAGATTTG
CATCGGTGTAATAATCTCGATTAAATCAACAAACCAGCACTAATACAATCACAACAAGACTAAATTAATAACTAATTAGGTCAACTATCACGCATCTGAA
TAAACCCAAATCAATAAACCTAAAATCAACCACTATTTAGGTAAAGCACAAGGCTCTCCGTCTTTGTAGAGATGTAAACACGATTAAATCAACAAATTGA
CATAACCTTGATGATAAAAAACAGATGAACATCTAATTAGGTCAAAAACAACGAAATCTATGCATATATATACACGTATAAACATAATCAAAACAACAAA
TT