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Detailed information on CNT30623314


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 9e-119

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-148

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3080575Daucus carotaBrassica juncea46.3581.4584.82685forward
CNT30153579Daucus carotaPrunus persica44.9941.9885.41665forward

Expression of CNT30623314

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MPSLSWILALTLSIVSELSTSRVMVFPVRVFTKICICTSTQSQQFRLHSNQTTNYV*

>peptide 2 (40 aa)
MVSELSTSKVIVFPVRVLTKICIPPRSLRTKWRVDSFWML*

Sequence

>CNT30623314
CACACGACCACAGCAAAATACTTATTAAACTGATCTTTTATTAAGACTTAAAGCCACCACAACACATTGTTCTTTCCCCCACAGGGGAAAACACTAAAAC
AAACTTTGATTTAAAACAAACAAGTTCAACAGAAACACAAACTTCTTTTCAGAAACCACAGCCACGGGCGCTTCCAACAGGCTTAGAGATCACCACCACG
AAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTCCTTCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGC
TGATCTGGAGGAATACCTTCCTTATCCTGAATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCCAAGGTGATAGTCTTTCCAGTCAGAG
TCTTGACAAAGATCTGCATACCACCACGGAGCCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTTCCATCCTCCAG
CTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTATCAGAGCTCTCGACC
TCAAGGGTGATTGTCTTTCCTGTCAAGTCTTGACGAAGATCTGCATACCACCACGAAGACGGAGGACCAAATGGAGAGTTGACTCCTTCTGGATATTGTA
GTCGGCAAGGGTCCTGCCGTCTTCAAGTTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTGACG
TTGTCGATTGTGTCGGAGCTTTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATTTGCATCTGTACATCAACACAATCACAACAAT
TTAGACTACATTCAAATCAAACAACTAATTATGTCTGACAACACATATCTACGTCTATTTAAACAATGAAACAATCAAAGCAGCCCTAATTTTATTAAGA
AAAATATACATATACACAGAGATTTGCATCGGTGTAATAATCTCGATTAAATCAACAAACCAGCACTAATACAATCACAACAAGACTAAATTAATAACTA
ATTAGGTCAACTATCACGCATCTGAATAAACCCAAATCAATAAACCTAAAATCAACCACTATTTAGGTAAAGCACAAGGCTCTCCGTCTTTGTAGAGATG
TAAACACGATTAAATCAACAAATTGACATAACCTTGATGATAAAAAACAGATGAACATCTAATTAGGTCAAAAACAACGAAATCTATGCATATATATACA
CGTATAAACATAATCAAAACAACAAATTTTCGCCAATTTAATCGTAATTAACAGCATGAACATATAATTAGCGACTAACAGAATGAAAAAGAAGAGAGAT
TGAAAACATACCTTGAAATTGATGAAAATATAGAGACAGAAAAGTGTATGTATATGATGAGAAGAGAAAGATAATTGT