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Detailed information on CNT30623089


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712768Daucus carotaGlycine max39.6169.6586.26684forward
CNT30636104Daucus carotaCapsicum annuum51.0172.3985.02881forward
CNT30510145Daucus carotaSolanum lycopersicum39.7848.2485.74687forward
CNT30114615Daucus carotaEutrema salsugineum52.492.2584.09905forward

Expression of CNT30623089

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVIVFPVKVLTKICIPPRSLRTKWRVDSFWML*

>peptide 2 (31 aa)
MVSELSTSKVIVFPVRVLTKICIPPRRRSTR*

>peptide 3 (56 aa)
MPSLSWILALTLSIVSELSTSRVMVFPVRVFTKICICTSTQSQQFRLHSNQTTNYV*

>peptide 4 (30 aa)
MVFPVKVLTKICIPPRRRRTKWRVDSFWIL*

Sequence

>CNT30623089
ATTAAACCAGAAACTATCACACGACCACAGCAAAATACTTATTAAACTGATCTTTTATTAAGACTTAAAGCCACCACAACACATTGTTCTTTCCCCCACA
GGGGAAAACACTAAAACAAACTTTGATTTAAAACAAACAAGTTCAACAGAAACACAAACTTCTTTTCAGAAACCACAGCCACGGGCGCTTCCAACAGGCT
TAGAGATCACCACCACGAAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTCCTTCCATCCTCAAGCTGCTTACCAG
CAAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATCCTGAATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCCAAGGTGAT
AGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCATACCACCACGGAGACGGAGCACAAGATGAAGGGTTGATTCCTTCTGGATATTGTAATCAGCTAGG
GTCCTGCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCAATGG
TGTCAGAGCTCTCAACCTCAAGAGTAATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCATACCACCACGGAGCCTGAGGACCAAGTGGAGAGTTGA
CTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC
TGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTTCCCTGTCAAAGTCTTGACGAAGATCTGCATACCACCAC
GAAGACGGAGGACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCAAGGGTCCTGCCGTCTTCAAGTTGCTTGCCAGCGAAGATCAACCTCTG
CTGGTCTGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGG
GTTTTCACAAAGATTTGCATCTGTACATCAACACAATCACAACAATTTAGACTACATTCAAATCAAACAACTAATTATGTCTGACAACACATATCTACGT
CTATTTAAACAATGAAACAATCAAAGCAGCCCTAATTTTATTAAGAAAAATATACATATACACAGAGATTTGCATCGGTGTAATAATCTCGATTAAATCA
ACAAACCAGCACTAATACAATCACAACAAGACTAAATTAATAACTAATTAGGTCAACTATCACGCATCTGAATAAACCCAAATCAATAAACCTAAAATCA
ACCACTATTTAGGTAAAGCACAAGGCTCTCCGTCTTTGTAGAGATGTAAACACGATTAAATCAACAAATTGACATAACCTTGATGATAAAAAACAGATGA
ACATCTAATTAGGTCAAAAACAACGAAATCTATGCATATATATACACGTATAAACATAATCAAAACAACAAATTTTCGCCAATTTAATCGTAATTAACAG
CATGAACATATAATTAGCGACTAACAGAATGAAAAAGAAGAGAGATTGAAAACATACCTTGAAATTGATGAAAATATAGAGACAGAAAAGTGTATGTATA
TGATGAGAAGAGAAAGATAATTGTGAG