Detailed information on CNT30622952


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30509004Daucus carotaSolanum lycopersicum33.337.8287.1878reverse complement
CNT30229065Daucus carotaAnanas comosus35.922.9594.0584reverse complement
CNT30679531Daucus carotaTriticum urartu63.6816.891.28149reverse complement
CNT30425623Daucus carotaPapaver somniferum33.3317.1196.1578reverse complement
CNT3053197Daucus carotaAmborella trichopoda32.484.7692.1176reverse complement
CNT3036892Daucus carotaCucumis melo35.97.7195.2484reverse complement

Expression of CNT30622952

Peptides detected in this lncRNA

>peptide 1 (43 aa)
SATRIFDIPFYFSSNEWHLLLETLAIFSFDDLYTVPNERSAQV*

>peptide 2 (47 aa)
MIYTPSLTNDRLRFEHDESLRADLLPINFPASYENGKLEHFLHRWMKN

Sequence

>CNT30622952
TCAGCCACTCGAATTTTCGATATTCCTTTTTATTTCTCATCAAATGAATGGCATCTTCTTCTGGAAACCCTAGCTATTTTTAGCTTTGATGATCTATACA
CCGTCCCTAACGAACGATCGGCTCAGGTTTGAGCATGATGAATCACTTCGTGCCGACCTGTTGCCAATAAACTTTCCGGCCTCATATGAGAATGGAAAAC
TGGAGCATTTTCTGCATCGGTGGATGAAGAATCG