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Detailed information on CNT30622898


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Daucus carotaNymphaea colorata51.1550.4283.63892forward
CNT3089455Daucus carotaVigna radiata50.5272.4585.81881forward
CNT3032244Daucus carotaTheobroma cacao52.4179.5583.48914forward
CNT3056329Daucus carotaAmborella trichopoda52.0178.5384.01907forward
CNT3024139Daucus carotaPopulus trichocarpa48.6278.9684.2848forward
CNT30326890Daucus carotaAsparagus officinalis51.272.3783.99893forward
CNT30111690Daucus carotaFicus carica50.6379.1984.94883forward
CNT30334097Daucus carotaCynara cardunculus51.281.2684.55893forward

Expression of CNT30622898

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVFPVRVLTKICIPPRSLRTKWRVDSFWML*

>peptide 2 (30 aa)
MVFPVKVLTKICIPPRRRRTKWRVDSFWIL*

>peptide 3 (56 aa)
MPSLSWILALTLSIVSELSTSRVMVFPVRVFTKICICTSTQSQQFRLHSNQTTNYV*

Sequence

>CNT30622898
ATTAAACCAGAAACTATCACACGACCACAGCAAAATACTTATTAAACTGATCTTTTATTAAGACTTAAAGCCACCACAACACATTGTTCTTTCCCCCACA
GGGGAAAACACTAAAACAAACTTTGATTTAAAACAAACAAGTTCAACAGAAACACAAACTTCTTTTCAGAAACCACAGCCACGGGCGCTTCCAACAGGCT
TAGAGATCACCACCACGAAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTCCTTCCATCCTCAAGCTGCTTACCAG
CAAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATCCTGAATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCCAAGGTGAT
AGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCATACCACCACGGAGCCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCAGCAAGG
GTCCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCG
TATCAGAGCTCTCGACCTCAAGGGTGATTGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATACCACCACGGAGCCTGAGGACCAAGTGGAGAGTTGA
CTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC
TGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTTCCCTGTCAAAGTCTTGACGAAGATCTGCATACCACCAC
GAAGACGGAGGACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCAAGGGTCCTGCCGTCTTCAAGTTGCTTGCCAGCGAAGATCAACCTCTG
CTGGTCTGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGG
GTTTTCACAAAGATTTGCATCTGTACATCAACACAATCACAACAATTTAGACTACATTCAAATCAAACAACTAATTATGTCTGACAACACATATCTACGT
CTATTTAAACAATGAAACAATCAAAGCAGCCCTAATTTTATTAAGAAAAATATACATATACACAGAGATTTGCATCGGTGTAATAATCTCGATTAAATCA
ACAAACCAGCACTAATACAATCACAACAAGACTAAATTAATAACTAATTAGGTCAACTATCACGCATCTGAATAAACCCAAATCAATAAACCTAAAATCA
ACCACTATTTAGGTAAAGCACAAGGCTCTCCGTCTTTGTAGAGATGTAAACACGATTAAATCAACAAATTGACATAACCTTGATGATAAAAAACAGATGA
ACATCTAATTAGGTCAAAAACAACGAAATCTATGCATATATATACACGTATAAACATAATCAAAACAACAAATTTTCGCCAATTTAATCGTAATTAACAG
CATGAACATATAATTAGCGACTAACAGAATGAAAAAGAAGAGAGATTGAAAACATACCTTGAAATTGATGAAAATATAGAGACAGAAAAGTGTATGTATA
TGATGAGAAGAGAAAGATAATTGTGAGGAGAAGAGGAGATGAGG