CANTATAdb - search

Detailed information on CNT30622816

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30615967	Daucus carota	Sesamum indicum	60.8	33.99	82.33	1143	forward
CNT3019912	Daucus carota	Citrullus lanatus	45.96	51.71	84.49	864	forward
CNT30169882	Daucus carota	Pistacia vera	60.74	55.36	82.4	1142	forward
CNT30423866	Daucus carota	Papaver somniferum	59.04	86.79	82.79	1110	forward
CNT30642981	Daucus carota	Cannabis sativa	48.4	81.11	83.19	910	forward
CNT30120599	Daucus carota	Citrus clementina	48.51	91.47	82.89	912	forward
CNT30174695	Daucus carota	Vigna angularis	47.34	85.41	85.17	890	forward
CNT30334101	Daucus carota	Cynara cardunculus	59.63	50.56	83.05	1121	forward

Expression of CNT30622816

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MPSLSWILALTLSIVSELSTSRVMVFPVRVFTKICICTSTQSQQFRLHSNQTTNYV*

>peptide 2 (31 aa)
MVSELSTSRVIVFPVKVLTKICIPPRRRSTR*

>peptide 3 (30 aa)
MVFPVKVLTKICIPPRRRRTKWRVDSFWIL*

>peptide 4 (40 aa)
MVSELSTSRVIVFPVKVLTKICIPPRSLRTKWRVDSFWML*

>peptide 5 (31 aa)
MVSELSTSKVIVFPVRVLTKICIPPRRRSTR*

Sequence

>CNT30622816
CATAGACAATAATATACCAGGCAAACATATCATACATCGTTAATATAAAACACAACCATAGTTTTAAAATAAAACAAGATTAAACCAGAAACTATCACAC
GACCACAGCAAAATACTTATTAAACTGATCTTTTATTAAGACTTAAAGCCACCACAACACATTGTTCTTTCCCCCACAGGGGAAAACACTAAAACAAACT
TTGATTTAAAACAAACAAGTTCAACAGAAACACAAACTTCTTTTCAGAAACCACAGCCACGGGCGCTTCCAACAGGCTTAGAGATCACCACCACGAAGAC
GCAACACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTCCTTCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATC
TGGAGGAATACCTTCCTTATCCTGAATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCCAAGGTGATAGTCTTTCCAGTCAGAGTCTTA
ACAAAGATCTGCATACCACCACGCAGACGAAGCACAAGGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCTGCCGTCTTCCAATTGCT
TTCCAGCAAAGATCAAACGCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCTCAAG
AGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATACCACCACGGAGACGGAGCACAAGATGAAGGGTTGATTCCTTCTGGATATTGTAATCA
GCTAGGGTCCTGCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGT
CAATGGTGTCAGAGCTCTCAACCTCAAGAGTAATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCATACCACCACGGAGCCTGAGGACCAAGTGGAG
AGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCC
TTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTTCCCTGTCAAAGTCTTGACGAAGATCTGCATAC
CACCACGAAGACGGAGGACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCAAGGGTCCTGCCGTCTTCAAGTTGCTTGCCAGCGAAGATCAA
CCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCGACCTCAAGGGTGATGGTCTTTCCG
GTGAGGGTTTTCACAAAGATTTGCATCTGTACATCAACACAATCACAACAATTTAGACTACATTCAAATCAAACAACTAATTATGTCTGACAACACATAT
CTACGTCTATTTAAACAATGAAACAATCAAAGCAGCCCTAATTTTATTAAGAAAAATATACATATACACAGAGATTTGCATCGGTGTAATAATCTCGATT
AAATCAACAAACCAGCACTAATACAATCACAACAAGACTAAATTAATAACTAATTAGGTCAACTATCACGCATCTGAATAAACCCAAATCAATAAACCTA
AAATCAACCACTATTTAGGTAAAGCACAAGGCTCTCCGTCTTTGTAGAGATGTAAACACGATTAAATCAACAAATTGACATAACCTTGATGATAAAAAAC
AGATGAACATCTAATTAGGTCAAAAACAACGAAATCTATGCATATATATACACGTATAAACATAATCAAAACAACAAATT