Detailed information on CNT30622585


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3089447Cajanus cajanVigna radiata59.8951.6990.2551forward

Expression of CNT30622585

Peptides detected in this lncRNA

>peptide 1 (42 aa)
VNFVNERDLSLLNSYVEVTLHGQLLRGLWPLRPRKIEAIIGL*

>peptide 2 (40 aa)
MQPQSGGKFRPRLSTSERPIANKYCEGKMKSTLKRESKSA*

>peptide 3 (45 aa)
MWNGVSRSADRLGALTDADCDGGPSPGCRNARGDVIVTIVDGSMRL

>peptide 4 (29 aa)
MGVDSMSRSDVERCEPICRSTRGIDRCGL*

>peptide 5 (33 aa)
MKIGCLWHLNCSLEKCPQWQTGSKSPGRGHQIG*

>peptide 6 (29 aa)
MRIVMVAQARVVEMLVETSSSRLWTVACAF

Sequence

>CNT30622585
GTTAATTTCGTTAACGAAAGAGACCTCAGCCTACTAAATAGCTATGTGGAGGTAACCCTCCACGGCCAGCTTCTTAGAGGGCTATGGCCGCTTAGGCCAC
GGAAAATTGAGGCAATAATAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTAATTTATTCAACGAGTCTATAACCTTGGCCGACA
GGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCTT
GTTGACTATGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTCATATCAATAAGCAGAGGAAAAGAAACTAACA
AGGATTCCCTTAGTAACAGCGAGCGAACCGGGAAGAGCCCACCATGAAAATCGGTTGTCTTTGGCATCTGAATTGTAGTCTGGAGAAGTGTCCTCAGTGG
CAGACCGGGTCCAAGTCCCCTGGAAGGGGGCACCAGATAGGGTGAGAGCCCCGTCGTGCCCGGACCTTGTCGCACCACGAGGCGCTGTCGATGAGTCGGG
TTGTTTTGGAATGCAGCCCCAATCGGGTGGTAAATTCCGTCCAAGGCTAAGTACTAGCGAGAGACCGATAGCGAACAAGTACTGCGAGGGAAAGATGAAA
AGTACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGAGAGGGAAGCGGATGGGGGTCGACAGTATGTCTCGGTCGGATGTGGAACGGTGTGAGCC
GATCTGCCGATCGACTCGGGGCATTGACCGATGCGGATTGTGATGGTGGCCCAAGCCCGGGTTGTCGAAATGCTCGTGGAGACGTCATCGTCACGATTGT
GGACGGTAGCATGCGCCTTC