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Detailed information on CNT30622400


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 4e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697930Cajanus cajanOryza sativa32.3567.8981.08296forward
CNT30674998Cajanus cajanSetaria viridis15.336.8491.43140forward
CNT30519871Cajanus cajanSetaria italica4055.2987.98366forward
CNT30315797Cajanus cajanCorylus avellana43.9360.8282.09402forward
CNT30547549Cajanus cajanIpomoea triloba40.5547.9380.05371forward
CNT30700039Cajanus cajanQuercus lobata39.5674.0383.7362forward
CNT30376827Cajanus cajanArabidopsis thaliana11.0442.885.15101forward
CNT30279437Cajanus cajanChenopodium quinoa30.2736.1681.95277forward
CNT3069241Cajanus cajanQuercus suber39.8982.9582.74365forward
CNT30380641Cajanus cajanManihot esculenta41.3154.778.57378forward
CNT30200358Cajanus cajanPisum sativum43.3963.8383.63397forward
CNT30709007Cajanus cajanGlycine max22.9588.2484.76210forward
CNT3048083Cajanus cajanPrunus dulcis42.6255.5681.79390forward
CNT30177168Cajanus cajanSecale cereale37.9246.789.63347forward
CNT30283601Cajanus cajanTriticum aestivum37.9253.889.63347forward
CNT30220094Cajanus cajanHordeum vulgare34.4354.8889.21315forward
CNT30398097Cajanus cajanTriticum turgidum40.8748.8987.7374forward
CNT30565750Cajanus cajanActinidia chinensis40.5533.7682.75371forward
CNT30591253Cajanus cajanMusa acuminata7.7622.7694.3771forward
CNT3084175Cajanus cajanVigna radiata41.236.1881.43377forward
CNT30508427Cajanus cajanSolanum lycopersicum9.8425.9484.4490forward
CNT30443502Cajanus cajanAegilops tauschii32.0247.3387.71293forward
CNT30240007Cajanus cajanAvena sativa35.5257.9391.69325forward
CNT30657055Cajanus cajanTriticum dicoccoides37.9266.3589.91347forward
CNT30259840Cajanus cajanBrassica rapa25.5780.9782.05234forward
CNT30613891Cajanus cajanArabis alpina18.2541.4481.44167forward
CNT30474628Cajanus cajanSaccharum spontaneum30.0523.1389.09275forward
CNT30141394Cajanus cajanLolium perenne44.1563.0387.62404forward
CNT306284Cajanus cajanZea mays25.57109.3581.62234forward
CNT30686633Cajanus cajanTriticum urartu6.4521.398.3159reverse complement
CNT30720909Cajanus cajanTriticum spelta37.9253.1489.91347forward
CNT30368649Cajanus cajanSorghum bicolor26.9958.8187.85247forward
CNT30596369Cajanus cajanOryza meridionalis6.4521.1596.6159forward
CNT30358481Cajanus cajanLactuca sativa35.9635.9279.33329forward
CNT30154413Cajanus cajanPrunus persica8.7420.6786.2580forward
CNT30418220Cajanus cajanPapaver somniferum10.1621.6382.893forward
CNT30644610Cajanus cajanCannabis sativa17.9235.6582.93164forward
CNT3053477Cajanus cajanAmborella trichopoda41.8661.1878.33383forward
CNT30148402Cajanus cajanBrachypodium distachyon18.2534.0186.83167forward
CNT3099660Cajanus cajanOryza rufipogon15.330.9191.43140forward
CNT30585391Cajanus cajanEchinochloa crusgalli44.1562.0687.87404forward
CNT3018856Cajanus cajanCyanidioschyzon merolae15.4161.381.56141forward

Expression of CNT30622400

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNGWYSFEGVTVRGSVTWQGGVQKAVDLAIMKGGDWC

>peptide 2 (37 aa)
MVVEKLEGAVWGFEIAGCARTVREMNGGMLSVDLLEK*

Sequence

>CNT30622400
GAAAAAGCCTTAATCATAGTAAAAGTCAAGAAAATCAAAAGCCCAATAACATGATTTAAAATAATAATAATAATAAATCAAAGAGCAAAACCACACTAAA
GTGAAACAATTGGAGCAGAAAGACGATAATTTCATTCATAATAGAACGTTACATAATCTTGAAAGAAAACCGCATTAACAGCTAAACAACAACCAACGCT
TGAAATTATCTATACAGACAAGCTAGGGGCTTAAGCATGCTCGCCCCTGATGCGCCTAGCTAGTTGAATGTCCTTGGGCATGATGGTGACGCGCTTGGCG
TGAATGGCGCAGAGGTTGGTGTCCTCAAAGAGACCAACGAGGTAGGCCTCGACGGCCTCCTGGAGCGCCGACACGGCGGAGCTCTGGAATCGGAGGTCGG
TCTTGAAGTCCTGCGCGATTTCCCGAACAAGGCGCTGGAACGGGAGCTTGCGGATGAGAAGCTCGGTGCTCTTCTAGTACTTGCAGATCTCGCGGAGCGC
CACCGTGCCGGGCCTGAATCGGTGGGGCTTCTTCACGCCGCCAGTGGTCGGAGCGGACTTTCTGGCGGCCTTCGTCGCCAGCTGCTTCCTCGGCGCCTTG
TCGCCGGTGGACTTGCGAGCAGTTTGCTTTGTGCGAGCCATCGAGAAAAGATGTTTTGTGACGAACAACGAAGTTTAGTGCTTTTGCTTCTTTGATGGTG
GTGGAAAAGTTGGAGGGAGCGGTGTGGGGTTTTGAAATTGCGGGGTGTGCGAGAACGGTGAGAGAGATGAATGGGGGAATGTTGAGCGTTGATTTGTTGG
AAAAATGAATGGGTGGTATTCCTTTGAGGGTGTGACAGTGCGTGGATCAGTGACGTGGCAGGGAGGAGTACAGAAGGCCGTTGATCTTGCGATAATGAAG
GGCGGAGATTGGTGT