Detailed information on CNT30622073


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7FNS2|PETD_ATRBE, E-value = 5e-94

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618210Cajanus cajanSesamum indicum26.1850.7295.24105reverse complement
CNT30407229Cajanus cajanBeta vulgaris70.8283.0488.03284forward
CNT30632300Cajanus cajanVigna unguiculata96.0150.296.1385forward
CNT30201894Cajanus cajanPisum sativum92.0220.7292.68369forward
CNT30504292Cajanus cajanNicotiana attenuata99.522.3793.98399forward
CNT30708642Cajanus cajanGlycine max44.1437.1194.92177forward
CNT3090242Cajanus cajanSolanum tuberosum100.2534.3990.3402forward
CNT30193370Cajanus cajanSecale cereale97.5124.2189.77391forward
CNT30286546Cajanus cajanTriticum aestivum94.5125.5689.97379forward
CNT30395700Cajanus cajanTriticum turgidum31.1726.9493.6125forward
CNT3085551Cajanus cajanVigna radiata12.7222.3794.1251forward
CNT30556068Cajanus cajanOryza glaberrima95.2652.0490.05382forward
CNT30145111Cajanus cajanMedicago truncatula47.3842.5194.21190forward
CNT30439089Cajanus cajanAegilops tauschii97.5124.0589.77391forward
CNT30662532Cajanus cajanTriticum dicoccoides97.5156.7588.49391forward
CNT30309624Cajanus cajanCamelina sativa91.2786.7391.26366forward
CNT30131654Cajanus cajanLolium perenne41.6556.886.23167forward
CNT30230699Cajanus cajanAnanas comosus78.5553.9494.29315forward
CNT30655369Cajanus cajanRosa chinensis90.2712.5394.48362forward
CNT30215737Cajanus cajanHelianthus annuus59.177.793.25237forward
CNT30679835Cajanus cajanTriticum urartu24.447.6490.8298forward
CNT30357898Cajanus cajanLactuca sativa53.3710.7289.25214forward
CNT30419844Cajanus cajanPapaver somniferum98.7566.3392.93396forward
CNT3025179Cajanus cajanPopulus trichocarpa79.84095.94320forward
CNT30104480Cajanus cajanOryza rufipogon72.3257.290290forward

Expression of CNT30622073

Peptides detected in this lncRNA

>peptide 1 (44 aa)
VATGRRNGFWNLLTFSKKGTVNNPAGTETIKRTPNNLLGTVRSI*

Sequence

>CNT30622073
TGTCGCTACTGGACGACGAAATGGGTTTTGGAATTTATTAACATTCTCAAAAAAGGGTACTGTTAATAACCCCGCCGGTACCGAAACCATTAAAAGAACG
CCCAATAACTTATTGGGCACTGTACGAAGTATTTGAAATACGGGAAAGAAATACCATTCAGGCAATATTTCCAAAGGAGTTGCAAATGGATCCGCGGGTT
CCCCAATCATTGATGGTTCTAGAACCGCTAAACCTACGTTACAAGCAATAGTACCTAGAATTACTACTGGAAAAATATATAAAAGATCGTTGGGCCATGC
GGGTTCTCCATAATAATTATGACCCATTCCTTTAGCCAATTTAGCTCTTAATACAGGATCATTCAAGTCAGGTTTTTTTGTTACTCCCATAATCCATTTT
T