CANTATAdb - search

Detailed information on CNT30622048

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30526500	Cajanus cajan	Phaseolus vulgaris	28.27	81.9	88.42	190	reverse complement
CNT30146786	Cajanus cajan	Medicago truncatula	16.22	50.23	83.49	109	reverse complement
CNT30174426	Cajanus cajan	Vigna angularis	22.62	11.58	87.5	152	forward

Expression of CNT30622048

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MGFCINCSVSCDDDNGYVTVLHEHVIHARLMMIMGVLLCFMKILFV

>peptide 2 (47 aa)
MRENCGDGCLSQLALFSLLGISLLLLFPSFSHLQTLPSFLRCKMTGN*

>peptide 3 (37 aa)
MVVCLNWLYFLCWVFLCCCYFQASPTFKHCPHFCVVK*

Sequence

>CNT30622048
ATTTAACAACACAGCGCCGCTCCCTCGCCCTAGCAGACATTTGAGACTCCCTCGCCTGCCCCGACACCTCCTTCCCTATTAGGTGCGGTCATACGGAACG
CAGCTTCTCAATATTGATAGGAGTTTCACAGTTTGCTTAGTACGTGGAAGTGGCAACCTTCAAGTATCAAAGAAAAATCCCTTCCAAGACATTTGTTTGA
TTGTGTTCAAGGTTGGCTGATTCTATGTAGTGGTTGGCTTCATTTGATGAGAGAAAATTGCGGGGATGGTTGTTTGTCTCAATTGGCTCTATTTTCTTTG
TTGGGTATTTCTTTGTTGTTGTTATTTCCAAGCTTCTCCCACCTTCAAACATTGCCCTCATTTCTGCGTTGTAAAATGACTGGTAATTAATTAATTAATT
AGTTCTGATATTGAGACGTGATTCTGTAGGTTTTTACTTTCATGTCAATGGTTTTTCAACATAATTGTCGATTTTGGGGAGGGCATAATTTAGGGTGTAG
AATGTAAGGGCTTGAAATTGCAATATGTTCTGTCATGGGTTTTTGTATAAATTGTTCTGTTTCGTGTGATGATGATAATGGGTATGTTACTGTGTTGCAT
GAACATGTCATTCATGCTCGTTTGATGATGATAATGGGTGTGTTACTGTGTTTCATGAAAATCTTATTCGTG