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Detailed information on CNT30621990


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672188Cajanus cajanSetaria viridis24.4731.9588.89162forward
CNT30530065Cajanus cajanEucalyptus grandis10.2720.0686.7668forward
CNT30545709Cajanus cajanIpomoea triloba25.3817.9987.5168forward
CNT30373447Cajanus cajanArabidopsis thaliana18.5820.283.74123forward
CNT30617482Cajanus cajanSesamum indicum40.0316.4784.15265forward
CNT30379145Cajanus cajanManihot esculenta18.4327.1190.16122forward
CNT30630273Cajanus cajanVigna unguiculata49.55102.8289.02328forward
CNT30487977Cajanus cajanOlea europaea14.236.1591.4994forward
CNT30504265Cajanus cajanNicotiana attenuata14.531.4885.4296forward
CNT30156599Cajanus cajanPistacia vera25.3822.2886.9168forward
CNT3097357Cajanus cajanSolanum tuberosum25.388.483.33168forward
CNT30125031Cajanus cajanPhyscomitrium patens22.6620.9584150forward
CNT30560106Cajanus cajanActinidia chinensis25.3831.5884.52168forward
CNT3085845Cajanus cajanVigna radiata24.4712.3790.12162forward
CNT30553743Cajanus cajanOryza glaberrima25.5322.7587.57169forward
CNT30147448Cajanus cajanMedicago truncatula45.1758.7483.28299forward
CNT30311950Cajanus cajanCamelina sativa24.4722.4782.1162forward
CNT3073928Cajanus cajanBrassica juncea14.521.9290.6296forward
CNT301326Cajanus cajanZea mays14.227.4190.4394forward
CNT30607166Cajanus cajanGossypium raimondii14.3526.0390.5395forward
CNT30231884Cajanus cajanAnanas comosus24.3215.2886.96161forward
CNT30204543Cajanus cajanHelianthus annuus15.4146.5887.25102forward
CNT30346128Cajanus cajanEragrostis tef25.2327.8886.23167forward
CNT30479425Cajanus cajanArabidopsis halleri22.5125.4381.88149forward
CNT30367748Cajanus cajanSorghum bicolor13.623.1488.8990forward
CNT30596276Cajanus cajanOryza meridionalis18.2821.7286.78121forward
CNT30120491Cajanus cajanCitrus clementina25.3847.3285.12168forward
CNT3037982Cajanus cajanCucumis melo19.0322.8388.89126forward
CNT30332036Cajanus cajanDioscorea rotundata13.4428.2589.8989forward
CNT30101815Cajanus cajanOryza rufipogon25.5331.1887.57169forward
CNT30576402Cajanus cajanOryza barthii25.5322.4487.57169forward
CNT30594303Cajanus cajanEragrostis curvula25.3826.2186.9168forward
CNT30175579Cajanus cajanVigna angularis24.4727.9890.74162forward
CNT30335796Cajanus cajanCynara cardunculus12.3920.689.0282forward

Expression of CNT30621990

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMIENHIAEDININSISHPHVKNTNRIQLF*

>peptide 2 (34 aa)
MEIEFSSKLICPVPLLFICFSNYGYGRLVLTWPS*

>peptide 3 (44 aa)
MVMVDWSSLGHHDFDELLIVDLPISINIGLTNHLINLLISQLQR*

Sequence

>CNT30621990
CGATTTAAACTCCAGTATTCAAAATGATGATAGAAAATCACATTGCAGAAGATATAAATATTAACAGCATTAGCCACCCACATGTAAAAAACACAAATCG
CATCCAATTGTTCTAGGTTCATAATAATAACCAAAAAAGATGAAAAGTGGAGTATCAAAGCATGGTGAGACACAGCTAACCGAAGCTACTAAAACAAGGG
ACAAGGCAAACAAGTAGGATACTAAGGAGAAGCAGTAGCAATTAAAGCAAACAAGAAAATAGACACTTAACTAACAAAAGCTAATAACCCCAAATCAAAG
ATGACCTAATGGAAATAGAATTCTCATCAAAACTTATCTGCCCTGTCCCTCTTCTCTTTATATGCTTTTCAAATTATGGTTATGGTCGATTGGTCCTCAC
TTGGCCATCATGACTTTGACGAACTCCTCATAGTTGATCTGCCCATCTCCATCAACATCGGCCTCACGAATCATCTCATCAACCTCCTCATCTCTCAGCT
GCAGAGATGAAACCATTCTGATCCTTGTCAAACACACGGAAAGCCTCCTTAAGCTCCTCCTCTGAATCAGTGTCCTTCATCTTGCGAGCCATCAGGTTCA
GGAACTCAGGGAAATCGATGGTTCCATTGCCATCAGCATCAACCTCATTTATCATATCCTGC