Detailed information on CNT30621647


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6VAF8|TBB3_GOSHI, E-value = 6e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675325Cajanus cajanSetaria viridis38.5315.3486.5289forward
CNT30522590Cajanus cajanSetaria italica38.535.3286.5289forward
CNT30727960Cajanus cajanCorchorus capsularis43.7220.1687.13101forward
CNT30380834Cajanus cajanManihot esculenta39.8321.683.792forward
CNT30488155Cajanus cajanOlea europaea28.5716.1889.3966forward
CNT3047350Cajanus cajanPrunus dulcis41.5642.1185.4296forward
CNT30388443Cajanus cajanTriticum turgidum33.3325.9387.0177forward
CNT30586725Cajanus cajanMusa acuminata26.848.9987.162forward
CNT3041960Cajanus cajanChlamydomonas reinhardtii24.2416.4287.556forward
CNT30213619Cajanus cajanHelianthus annuus38.5328.0883.1589forward
CNT30627268Cajanus cajanDaucus carota38.967.2784.4490forward
CNT30368464Cajanus cajanSorghum bicolor38.5310.8386.5289forward
CNT3022287Cajanus cajanPopulus trichocarpa29.4416.5588.2468forward

Expression of CNT30621647

Peptides detected in this lncRNA

>peptide 1 (76 aa)
TRSCPAGRSARTAPSSRCPSSPAPVADLSVQCTSPLDLCRARRTPLPRTSNRSGSRIALPEREGSLSFSPAIQTLVN

>peptide 2 (59 aa)
TKLSGRKICPYGPVLTLSIVPGSSCRSECPMYFPVGSMPCSSHTTSQNFEPIWFPHCPP*

Sequence

>CNT30621647
ACACGAAGTTGTCCGGCCGGAAGATCTGCCCGTACGGCCCCGTCCTCACGCTGTCCATCGTCCCCGGCTCCAGTTGCAGATCTGAGTGTCCAATGTACTT
CCCCGTTGGATCTATGCCGTGCTCGTCGCACACCACTTCCCAGAACTTCGAACCGATCTGGTTCCCGCATTGCCCTCCCTGAACGTGAAGGATCTCTCTC
ATTTTCCCCTGCGATTCAAACACTCGTTAAT